CONSOLIDATED BALANCE SHEETS - USD ($) $ in Thousands	Sep. 30, 2015	Sep. 30, 2014
Current assets
Cash and cash equivalents	$ 80,722	$ 94,114
Marketable securities	70,021	68,130
Accounts receivable, net	86,448	80,106
Inventories	100,619	93,567
Deferred tax assets	17,609	19,009
Assets held for sale	2,900	0
Prepaid expenses and other current assets	15,158	19,387
Total current assets	373,477	374,313
Property, plant and equipment, net	41,855	50,183
Long-term marketable securities	63,287	83,212
Long-term deferred tax assets	70,476	67,563
Goodwill	121,408	109,501
Intangible assets, net	55,446	59,550
Equity method investments	24,308	28,944
Other assets	9,397	4,772
Total assets	759,654	778,038
Current liabilities
Accounts payable	44,890	33,740
Capital lease obligation	0	881
Deferred revenue	17,886	26,279
Accrued warranty and retrofit costs	6,089	6,499
Accrued compensation and benefits	20,401	21,663
Accrued restructuring costs	2,073	3,475
Accrued income taxes payable	6,111	1,808
Deferred tax liabilities	1,251	808
Accrued expenses and other current liabilities	15,550	18,688
Total current liabilities	114,251	113,841
Long-term capital lease obligation	0	7,417
Long-term tax reserves	3,644	5,708
Long-term deferred tax liabilities	3,196	2,567
Long-term pension liability	3,118	1,774
Other long-term liabilities	3,400	3,842
Total liabilities	$ 127,609	$ 135,149
Commitments and contingencies (Note 21)
Equity
Preferred stock, $0.01 par value- 1,000,000 shares authorized, no shares issued or outstanding	$ 0	$ 0
Common stock, $0.01 par value- 125,000,000 shares authorized, 81,093,052 shares issued and 67,631,183 shares outstanding at September 30, 2015, 80,375,777 shares issued and 66,913,908 shares outstanding at September 30, 2014	811	804
Additional paid-in capital	1,846,357	1,834,619
Accumulated other comprehensive income	5,898	15,687
Treasury stock at cost, 13,461,869 shares	(200,956)	(200,956)
Total Brooks Automation, Inc. stockholders’ equity	(1,020,065)	(1,007,265)
Total equity	632,045	642,889
Total liabilities and equity	$ 759,654	$ 778,038