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Consolidated Statements of Cash Flows (Unaudited) (USD $)
In Thousands, unless otherwise specified
3 Months Ended
Mar. 31, 2014
Mar. 31, 2013
Cash flows from operating activities    
Net loss $ (36,424) $ (14,484)
Adjustments:    
Depreciation and amortization 1,407 1,314
Stock compensation expense 3,181 1,716
Amortization of premium on investments 687 674
Changes in assets and liabilities:    
Accounts receivable (73) 6
Prepaid expenses, other current assets and other assets (2,552) (2,482)
Accounts payable (956) (495)
Accrued expenses, other current liabilities and other liabilities 832 (481)
Deferred revenue (139) (2,919)
Net cash used in operating activities (34,037) (17,151)
Cash flows from investing activities    
Purchase of available for sale investments (167,577) (103,776)
Proceeds from sales and maturities available for sale investments 90,650 43,000
Capital expenditures (3,245) (2,412)
Restricted cash 320 (2,868)
Net cash used in investing activities (79,852) (66,056)
Cash flows from financing activities    
Proceeds from issuance of common stock, net of issuance costs 200,925 111,055
Proceeds from exercise of stock options 3,163 2,034
Net cash provided by financing activities 204,088 113,089
Effect of exchange rate on cash (5) (3)
Net increase in cash and equivalents 90,194 29,879
Cash and equivalents at the beginning of period 62,137 23,883
Cash and equivalents at the end of period 152,331 53,762
Capitalization of construction in progress related to facility lease obligation (Note 8) 1,574  
Capital expenditures incurred but not yet paid $ 2,633