13F-HR 1 q21013f.txt 2Q1013F-HR Form 13F Form 13F COVER PAGE Report for the Calendar Year or Quarter Ended: 30-Jun-10 Check here if Amendment [ ] ; Amendment Number: ________ This Amendment (Check only one.): [ ] is a restatement. [ ] adds new holdings entries. Institutional Investment Manger Filing this Report: Name: Perkins Capital Management, Inc. Address: 730 East Lake Street, Wayzata, Minnesota 55391 SEC File Number: 801-22888 The institutional investment manager filing this report an the person by whom it is signed hereby represent that the person signing the report is authorized to submit it, that all information contained herein is true, correct and complete, and that is understood that all required items, statements, schedules, lists and tables are considered integral parts of this form. Person signing on this Report on Behalf of Reporting Manager: Name: Richard C. Perkins Title: Executive Vice President/Portfolio Manager Phone: (952) 473-8367 Signature: Place and Date of Signing: 28-Jul-10 Report Type (Check only one.): [ X ] 13F HOLDINGS REPORT. (Check here if all holdings of this reporting manager are reported in this report.) [ ] 13F NOTICE. (Check here if no holdings reported are in this report, and all holdings are reported by other reporting manager(s).) [ ] 13F COMBINATION REPORT. (Check here if a portion of the holdings for this reporting manager are reported in this report and a portion are reported by other reporting manager(s).) TITLE VALUE SHARES/ SH/ PUT/ INVT OTR VOTING AUTHORITY NAME OF ISSUER OF CLS CUSIP X1000 PRN AMT PRN CALL DSCRTN MGRS SOLE SHRD NONE ABRAXAS PETE CORP COM 003830106 420 150000 SH Sole 150000 ACTIV IDENTITY CORP COM 00506P103 264 138150 SH Sole 60650 77500 ADDVANTAGE TECH NOLOGIES GP I COM NEW 006743306 226 80000 SH Sole 80000 ADVANCED ANALO GIC TECHNOLOGI COM 00752J108 166 52000 SH Sole 50000 2000 ALPHATEC HOLD INGS INC COM 02081G102 74 16000 SH Sole 16000 ALTRIA GROUP INC COM 02209S103 286 14250 SH Sole 10750 3500 AMYLIN PHARMA CEUTICALS INC COM 032346108 192 10200 SH Sole 6400 3800 ANGEION CORP COM 03462H404 99 25000 SH Sole 25000 APPLIANCE RECY CLING CTRS AME COM NEW 03814F205 2366 867925 SH Sole 561300 306625 ARRAY BIO PHARMA INC COM 04269X105 1116 366000 SH Sole 138500 227500 ART TECHNOLOGY GROUP INC COM 04289L107 692 202200 SH Sole 88400 113800 ASPENBIO PHARMA INC COM 045346103 876 893700 SH Sole 589700 304000 AT&T INC COM 00206R102 307 12694 SH Sole 5000 7694 ATRICURE INC COM 04963C209 1469 220858 SH Sole 124458 96400 ATS MED INC COM 002083103 699 176000 SH Sole 53500 122500 BAXTER INTL INC COM 071813109 421 10350 SH Sole 6850 3500 BLUEPHOENIX SOLU TIONS LTD SHS M20157109 78 64125 SH Sole 30475 33650 BOEING CO COM 097023105 411 6550 SH Sole 4650 1900 BOSTON SCIEN TIFIC CORP COM 101137107 234 40350 SH Sole 21100 19250 BRIDGELINE DIGITAL INC COM 10807Q205 72 61000 SH Sole 61000 BRISTOL MYERS SQUIBB CO COM 110122108 1271 50950 SH Sole 23900 27050 BRUSH ENGINEERED MATLS INC COM 117421107 221 11084 SH Sole 8084 3000 CALIFORNIA PIZZA KITCHEN INC COM 13054D109 227 15000 SH Sole 15000 CALIX INC COM 13100M509 357 34803 SH Sole 5371 29432 CARDICA INC COM 14141R101 607 370403 SH Sole 240277 130126 CARDIONET INC COM 14159L103 1082 197500 SH Sole 77250 120250 CARDIOVASCULAR SYS INC DEL COM 141619106 857 191300 SH Sole 71500 119800 CHINA NEW BORUN CORP ADR 16890T105 58 10000 SH Sole 10000 CLARIENT INC COM 180489106 2355 764500 SH Sole 326300 438200 CLICKSOFTWARE TECHNOLOGIES L ORD M25082104 528 99250 SH Sole 42000 57250 COLEMAN CABLE INC COM 193459302 128 22615 SH Sole 20000 2615 COMPELLENT TECH NOLOGIES INC COM 20452A108 884 72950 SH Sole 32200 40750 COMPUTER TASK GROUP INC COM 205477102 730 113000 SH Sole 100000 13000 CONCEPTUS INC COM 206016107 617 39600 SH Sole 20200 19400 CONEXANT SYSTEMS INC COM NEW 207142308 302 135000 SH Sole 135000 CORVEL CORP COM 221006109 1137 33650 SH Sole 16575 17075 CYTORI THERA PEUTICS INC COM 23283K105 1956 562100 SH Sole 397400 164700 DATALINK CORP COM 237934104 1222 283450 SH Sole 77360 206090 DELUXE CORP COM 248019101 667 35575 SH Sole 21775 13800 DEXCOM INC COM 252131107 3225 279000 SH Sole 193900 85100 DIAMOND FOODS INC COM 252603105 1580 38450 SH Sole 22150 16300 DIGIRAD CORP COM 253827109 784 376900 SH Sole 162400 214500 DONALDSON INC COM 257651109 1636 38350 SH Sole 15170 23180 DOT HILL SYS CORP COM 25848T109 1337 1123724 SH Sole 394956 728768 EASTMAN KODAK CO COM 277461109 608 140000 SH Sole 67500 72500 EBIX INC COM NEW 278715206 941 60000 SH Sole 60000 EDAP TMS S A SPN ADR 268311107 116 50000 SH Sole 50000 ENDOLOGIX INC COM 29266S106 2048 452019 SH Sole 205386 246633 ENERGY TRANSFER EQUITY L P CMUN LP 29273V100 235 6950 SH Sole 4000 2950 ENZO BIO CHEM INC COM 294100102 102 25000 SH Sole 25000 EPLUS INC COM 294268107 726 41500 SH Sole 29500 12000 EXACT SCIENCES CORP COM 30063P105 398 90500 SH Sole 78500 12000 FAMOUS DAVES AMER INC COM 307068106 1558 186600 SH Sole 105800 80800 FSI INTL INC COM 302633102 419 100000 SH Sole 100000 FULLER H B CO COM 359694106 649 34154 SH Sole 15604 18550 GENERAL MLS INC COM 370334104 214 6012 SH Sole 2812 3200 GENMARK DIAG NOSTICS INC COM 372309104 221 50000 SH Sole 27000 23000 GLAXOSMITH KLINE PLC SPN ADR 37733W105 406 11950 SH Sole 5700 6250 GLOBAL TRAFFIC NETWORK INC COM 37947B103 803 149169 SH Sole 55041 94128 GLOBECOMM SYSTEMS INC COM 37956X103 1250 151460 SH Sole 44421 107039 GRAINGER W W INC COM 384802104 647 6502 SH Sole 3152 3350 GRANITE CITY FOOD & BREWERY COM NEW 38724Q404 92 54164 SH Sole 9499 44665 HANSEN MEDICAL INC COM 411307101 1091 512000 SH Sole 209000 303000 HEALTH CARE REIT INC COM 42217K106 453 10750 SH Sole 6500 4250 HEALTH GRADES INC COM 42218Q102 761 126886 SH Sole 56786 70100 HESKA CORP COM RES 42805E207 124 200000 SH Sole 200000 HOLOGIC INC COM 436440101 177 12700 SH Sole 7700 5000 ICAD INC COM 44934S107 334 175000 SH Sole 175000 ILLUMINA INC COM 452327109 1251 28750 SH Sole 19250 9500 IMAGE SENSING SYS INC COM 45244C104 665 49450 SH Sole 25150 24300 INCONTACT INC COM 45336E109 260 106100 SH Sole 52600 53500 INNER WORKINGS INC COM 45773Y105 205 30000 SH Sole 30000 INSIGNIA SYS INC COM 45765Y105 6513 1243010 SH Sole 891843 351167 INTEGRAMED AMER INC COM NEW 45810N302 3062 374300 SH Sole 192400 181900 INTERNATIONAL BUSINESS MACHS COM 459200101 534 4326 SH Sole 2251 2075 INVENTURE FOODS INC COM 461212102 261 86000 SH Sole 80000 6000 ISIS PHARMA CEUTICALS INC COM 464330109 1933 202000 SH Sole 142650 59350 JOHNSON & JOHNSON COM 478160104 545 9220 SH Sole 5370 3850 LAKES ENTMNT INC COM 51206P109 130 84700 SH Sole 62881 21819 LIFE PARTNERS HOLDINGS INC COM 53215T106 302 14750 SH Sole 13750 1000 LILLY ELI & CO COM 532457108 983 29350 SH Sole 13550 15800 LIONBRIDGE TECH NOLOGIES INC COM 536252109 251 55000 SH Sole 30000 25000 MANPOWER INC COM 56418H100 575 13323 SH Sole 5173 8150 MATTSON TECH NOLOGY INC COM 577223100 189 50000 SH Sole 50000 MEDTOX SCIEN TIFIC INC COM NEW 584977201 959 78000 SH Sole 25000 53000 MEDTRONIC INC COM 585055106 285 7850 SH Sole 3226 4624 METROPOLITAN HLTH NETWORKS COM 592142103 280 75000 SH Sole 75000 MIDWAY GOLD CORP COM 598153104 34 75000 SH Sole 75000 MOLSON COORS BREWING CO CL B 60871R209 974 23000 SH Sole 9400 13600 MULTIBAND CORP COM NEW 62544X209 64 40000 SH Sole 40000 NAVARRE CORP COM 639208107 3086 1415500 SH Sole 616000 799500 NETSCOUT SYS INC COM 64115T104 441 31000 SH Sole 30000 1000 NORTECH SYS INC COM 656553104 159 45500 SH Sole 32500 13000 OCULUS INNOVATIVE SCIENCES I COM 67575P108 1549 759284 SH Sole 370926 388358 ONCOTHYREON INC COM 682324108 2236 675479 SH Sole 469863 205616 ORION ENERGY SYSTEMS INC COM 686275108 1024 323954 SH Sole 117750 206204 ORTHOVITA INC COM 68750U102 2340 1152714 SH Sole 661303 491411 PATTERSON COMPANIES INC COM 703395103 1344 47100 SH Sole 18750 28350 PENTAIR INC COM 709631105 699 21717 SH Sole 11467 10250 PETROLEUM DEV CORP COM 716578109 307 12000 SH Sole 9000 3000 PFIZER INC COM 717081103 1254 87931 SH Sole 27541 60390 PFSWEB INC COM NEW 717098206 215 75000 SH Sole 75000 PLANAR SYS INC COM 726900103 70 41000 SH Sole 40000 1000 POLYMET MINING CORP COM 731916102 93 63500 SH Sole 63500 PRIDE INTL INC DEL COM 74153Q102 490 21950 SH Sole 11600 10350 RADNET INC COM 750491102 190 80000 SH Sole 80000 RAINMAKER SYSTEM COM NEW 750875304 895 745838 SH Sole 336138 409700 RAMTRON INTL CORP COM NEW 751907304 675 259591 SH Sole 122729 136862 RCM TECH NOLOGIES INC COM NEW 749360400 621 139000 SH Sole 85500 53500 REAL GOODS SOLAR INC CL A 75601N104 213 67450 SH Sole 17572 49878 ROCKWELL MEDICAL TECH COM 774374102 2277 425500 SH Sole 35000 390500 ROSETTA GE NOMICS LTD SHS M82183100 651 409536 SH Sole 195179 214357 RTI BIO LOGICS INC COM 74975N105 632 215550 SH Sole 80750 134800 SANOFI AVENTIS SPN ADR 80105N105 278 9250 SH Sole 4650 4600 SPAN AMER MED SYS INC COM 846396109 485 27750 SH Sole 20500 7250 ST JUDE MED INC COM 790849103 2925 81048 SH Sole 15500 65548 STAAR SURGICAL CO CMPR01 852312305 3581 626100 SH Sole 431100 195000 SUMMER INFANT INC COM 865646103 331 50500 SH Sole 40000 10500 SUPERVALU INC COM 868536103 1946 179550 SH Sole 92500 87050 SYNOVIS LIFE TECH NOLOGIES IN COM 87162G105 4576 299450 SH Sole 180600 118850 TARGET CORP COM 87612E106 226 4600 SH Sole 4600 TCF FINL CORP COM 872275102 1131 68100 SH Sole 25900 42200 TENGION INC COM 88034G109 372 99900 SH Sole 39000 60900 TEREX CORP NEW COM 880779103 403 21500 SH Sole 10750 10750 TRANS1 INC COM 89385X105 267 102400 SH Sole 77900 24500 UNITEDHEALTH GROUP INC COM 91324P102 700 24650 SH Sole 8300 16350 UQM TECH NOLOGIES INC COM 903213106 396 116750 SH Sole 61750 55000 UROLOGIX INC COM 917273104 3318 3101085 SH Sole 2155050 946035 UROPLASTY INC COM NEW 917277204 3999 840055 SH Sole 423657 416398 U. S. AUTO PARTS NETWORK INC COM 90343C100 1456 242650 SH Sole 118150 124500 US BANCORP DEL COM NEW 902973304 573 25647 SH Sole 11748 13899 U S PHYSICAL THERAPY INC COM 90337L108 1361 80650 SH Sole 47000 33650 USEC INC COM 90333E108 462 97000 SH Sole 72500 24500 VERSO PAPER CORP COM 92531L108 462 200000 SH Sole 200000 VIRTUAL RADIO LOGIC CORPORATI COM 92826B104 1175 68500 SH Sole 39000 29500 VIRTUSA CORP COM 92827P102 499 53500 SH Sole 17000 36500 VITAL IMAGES INC COM 92846N104 6049 474446 SH Sole 172344 302102 WIRELESS RONIN TECHNOLOGIES COM 97652A203 2524 2069333 SH Sole 903511 1165822 ZAGG INCORPORATED COM 98884U108 57 20000 SH Sole 20000 ZIX CORP COM 98974P100 5223 2310671 SH Sole 1012905 1297766 ZOLTEK COS INC COM 98975W104 93 11000 SH Sole 5500 5500 TOTAL VALUE 135193 DATA RECORDS 141 OTHER MANAGERS ON WHOSE BEHALF REPORT IS FILED 0