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Collaborative Arrangements (Details) (USD $)
3 Months Ended9 Months Ended1 Months Ended3 Months Ended9 Months Ended12 Months Ended1 Months Ended3 Months Ended9 Months Ended1 Months Ended3 Months Ended9 Months Ended12 Months Ended1 Months Ended3 Months Ended9 Months Ended
Sep. 30, 2011
Sep. 30, 2010
Sep. 30, 2011
Sep. 30, 2010
Dec. 31, 2010
Sep. 30, 2009
Janssen Pharmaceutica, N.V.
transactions
Jul. 31, 2006
Janssen Pharmaceutica, N.V.
Jun. 30, 2006
Janssen Pharmaceutica, N.V.
years
Sep. 30, 2011
Janssen Pharmaceutica, N.V.
Mar. 31, 2011
Janssen Pharmaceutica, N.V.
Sep. 30, 2010
Janssen Pharmaceutica, N.V.
Sep. 30, 2011
Janssen Pharmaceutica, N.V.
Sep. 30, 2010
Janssen Pharmaceutica, N.V.
Dec. 31, 2010
Janssen Pharmaceutica, N.V.
Dec. 31, 2009
Janssen Pharmaceutica, N.V.
Dec. 31, 2007
Janssen Pharmaceutica, N.V.
Jul. 31, 2009
Mitsubishi Tanabe Pharma Corporation
days
Sep. 30, 2011
Mitsubishi Tanabe Pharma Corporation
Sep. 30, 2010
Mitsubishi Tanabe Pharma Corporation
Sep. 30, 2011
Mitsubishi Tanabe Pharma Corporation
Sep. 30, 2010
Mitsubishi Tanabe Pharma Corporation
Apr. 30, 2011
Cystic Fibrosis Foundation Therapeutics Incorporated
years
Sep. 30, 2011
Cystic Fibrosis Foundation Therapeutics Incorporated
Sep. 30, 2011
Cystic Fibrosis Foundation Therapeutics Incorporated
payments
Dec. 31, 2006
Cystic Fibrosis Foundation Therapeutics Incorporated
amendments
Jun. 30, 2011
Alios BioPharma, Inc
days
years
analogues
Sep. 30, 2011
Alios BioPharma, Inc
lines
Jun. 30, 2011
Alios BioPharma, Inc
Sep. 30, 2011
Alios BioPharma, Inc
lines
Jun. 13, 2011
Alios BioPharma, Inc
Schedule of Collaborative Arrangements                              
Drug development costs to be paid by collaborator (as a percent)       50.00%   50.00%                  
Up-front license payment      $ 165,000,000                       
Decrease in revenue recognition per quarter due to change in estimate regarding period of performance under Janssen collaboration agreement             1,400,0001,100,0002,600,000              
Deferred revenue related to up-front license payment        59,000,000  59,000,000     22,300,000 22,300,000          
Total contingent milestone payments earned           350,000,000                  
Milestone payment earned pusuant to the collaborative agreement        200,000,00050,000,000 250,000,000                  
Number of financial transactions entered into related to milestones (in transactions)     2                        
Tiered royalty average range, as a percentage of net sales in the Janssen territories       mid-20% range                      
Notice period required to terminate without cause after receipt of marketing approval (in years)       1                      
License fee paid upon amendment of agreement                105,000,000             
Contingent milestone payment, low end of range                15,000,000             
Contingent milestone payment, high end of range                65,000,000             
Notice period required to terminate without cause (in days)                60             
Collaborative revenues recognized                              
Amortized portion of up-front payment        3,107,000 3,107,0009,321,0009,321,000    9,558,0009,558,00028,674,00028,674,000         
Development milestone revenues        200,000,000  250,000,000     1,758,000 3,152,000      10,000,00010,000,000  
Net reimbursement (payment) for telaprevir development costs        (2,557,000) 1,148,000(6,810,000)7,055,000                 
Reimbursement for manufacturing services        7,170,000 311,00020,383,0006,536,000    8,184,0001,498,00014,032,0003,976,000         
Total collaborative revenues attributable to the collaboration231,066,00015,622,000328,546,00056,004,000    207,720,000 4,566,000272,894,00022,912,000    19,500,00011,056,00045,858,00032,650,000 3,800,0009,800,000      
Number of amendments entered into for partial funding (in amendments)                        2     
Collaborative funding                     75,000,000        
Number of years over which funding will be made (in years)                     5        
Milestone payment received                        1,500,000     
Collaborative revenues231,066,00015,622,000328,546,00056,004,000    207,720,000 4,566,000272,894,00022,912,000    19,500,00011,056,00045,858,00032,650,000 3,800,0009,800,000      
Number of commercial milestone payments for achievement of certain sales levels for potentiator compound such as VX-770 (in payments)                       2      
Number of commercial milestone payments for achievement of certain sales levels for corrector compound such as VX-809 or VX-661 (in payments)                       2      
Number of nucleotide analogues discovered by acquiree (in analogues)                         2    
Research and development milestone payments, maximum                         715,000,000    
Commercial milestone payments, maximum                         750,000,000    
Notice period for termination of contract due to technical failure (in days)                         30    
Notice period for termination of contract after completion of clinical trials (in days)                         60    
Latest expiration period for royalty obligation after first commercial sale in country unless contract is terminated earlier (in years)                         10    
Discount rate for contingent milestones and royalty payments for development milestones, low end of range (as a percent)                             3.60%
Discount rate for contingent milestones and royalty payments for development milestones, high end of range (as a percent)                             6.50%
Discount rate for contingent milestones and royalty payments for commercial milestones and royalties (as a percent)                             9.40%
Up-front payment                          60,000,000 60,000,00060,000,000
Fair value of contingent milestone and royalty payments                             197,720,000
Total Consideration                             257,720,000
Discount rate for intangible assets acquired (as a percent)                             9.50%
Intangible assets                             250,600,000
Goodwill                             7,399,000
Deferred tax liability(231,184,000)[1] (231,184,000)[1] (160,278,000)                    (100,076,000)(103,598,000)(100,076,000)(103,598,000)(89,155,000)
Net other assets (liabilities)                             (279,000)
Net assets attributable to noncontrolling interests (Alios)                             168,565,000
Noncontrolling Interest (Alios)                              
Number of lines on balance sheet where noncontrolling interest is reported                          2 2 
Development milestone revenues        200,000,000  250,000,000     1,758,000 3,152,000      10,000,00010,000,000  
Income (loss) before provision for income taxes                          (5,258,000) (6,059,000) 
Provision for (benefit from) income taxes(27,842,000) (3,394,000)                       (4,850,000) (29,298,000) 
Change in fair value of contingent milestone and royalty payments                          17,450,000 17,450,000 
Net income (loss) attributable to noncontrolling interest (Alios)7,342,000 (17,907,000)                       7,342,000 (17,907,000) 
Restricted cash and cash equivalents (Alios)50,580,000[1] 50,580,000[1]                       50,580,000 50,580,0004,575,000
Accounts receivable, net445,661,000[1] 445,661,000[1] 12,529,000                     25,000 25,000 
Prepaid expenses and other current assets23,245,000[1] 23,245,000[1] 13,099,000                     597,000 597,00069,000
Property and equipment, net101,268,000[1] 101,268,000[1] 72,333,000                     1,645,000 1,645,000885,000
Intangible assets663,500,000[1] 663,500,000[1] 518,700,000                     250,600,000 250,600,000250,600,000
Goodwill33,501,000[1] 33,501,000[1] 26,102,000                     7,399,000 7,399,0007,399,000
Other assets13,785,000[1] 13,785,000[1] 17,182,000                     133,000 133,00076,000
Accounts payable49,248,000[1] 49,248,000[1] 35,851,000                     1,905,000 1,905,0001,189,000
Accrued expenses and other current liabilities229,865,000[1] 229,865,000[1] 134,414,000                     1,186,000 1,186,0001,504,000
Income taxes payable (Alios)9,755,000[1] 9,755,000[1]                       9,755,000 9,755,000 
Deferred tax liability231,184,000[1] 231,184,000[1] 160,278,000                    100,076,000103,598,000100,076,000103,598,00089,155,000
Other liabilities7,848,000[1] 7,848,000[1] 2,265,000                     3,206,000 3,206,0003,191,000
Redeemable noncontrolling interest (Alios)36,696,000[1] 36,696,000[1]                       36,696,000 36,696,00036,299,000
Noncontrolling interest (Alios)$ 114,388,000[1] $ 114,388,000[1]                       $ 114,388,000 $ 114,388,000$ 132,266,000
[1]Amounts include the assets and liabilities of Vertex's variable interest entity ("VIE"), Alios BioPharma, Inc. ("Alios"). Vertex's interests and obligations with respect to the VIE's assets and liabilities are limited to those accorded to Vertex in its agreement with Alios. See Note K to these condensed consolidated financial statements for amounts.