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Condensed Consolidated Statements of Cash Flows - USD ($)
$ in Thousands
3 Months Ended
Mar. 31, 2016
Mar. 31, 2015
Cash flows from operating activities:    
Net loss $ (59,770) $ (61,559)
Adjustments to reconcile net income to cash flows from operating activities:    
Depreciation and amortization 1,397 1,280
Amortization of premium on available-for-sale securities and non-cash interest 242 315
Loss on abandonment of patents 15 131
Stock-based compensation 6,835 14,156
Changes in operating assets and liabilities, net:    
Net increase in accounts receivable (13)  
Net (increase) decrease in other assets (3,180) 7,413
Net decrease in accounts payable, accrued expenses, deferred revenue and other liabilities (6,214) (5,084)
Net cash used in operating activities (60,688) (43,348)
Cash flows from investing activities:    
Purchase of property and equipment (1,168) (532)
Patent costs (410) (391)
Maturity of available-for-sale securities 21,000 44,750
Net cash provided by investing activities 19,422 43,827
Cash flows from financing activities:    
Repayments of long-term debt and notes payable (2,525) (25)
Proceeds from exercise of options and purchase of stock under the Employee Stock Purchase Program 1,488 431
Net cash (used in) provided by financing activities (1,037) 406
(Decrease) increase in cash and cash equivalents (42,303) 885
Cash and cash equivalents:    
Beginning of period 80,304 73,551
End of period 38,001 74,436
Supplemental disclosure of cash flow information:    
Cash paid during the period for interest 409 18
Supplemental schedule of non-cash investing activities and financing activities:    
Property and equipment included in accrued expenses 19 45
Patent costs included in accrued expenses 192 100
Shares withheld for taxes $ 44  
Capitalized interest   $ 99