Exhibit 32.1

                          CEO CERTIFICATION PURSUANT TO
                             18 U.S.C. SECTION 1350



In  connection  with the  Quarterly  Report of  Emclaire  Financial  Corp.  (the
Corporation)  on Form 10-Q for the period ending June 30, 2008 as filed with the
Securities  and Exchange  Commission on the date here (the Report),  I, David L.
Cox, Chief Executive Officer of the Corporation,  certify, pursuant to 18 U.S.C.
ss.  1350,  as adopted  pursuant to ss. 906 of the  Sarbanes-Oxley  Act of 2002,
that:

         (1)      The Report fully  complies  with the  requirements  of section
                  13(a) or 15(d) of the Securities Exchange Act of 1934; and

         (2)      The information  contained in the Report fairly  presents,  in
                  all material respects,  the consolidated  financial  condition
                  and result of operations of the Corporation.



/s/  David L. Cox
-----------------

David L. Cox
Chairman of the Board,
President and Chief Executive Officer


August 14, 2008