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Summary of Significant Accounting Policies (Details) (USD $)
Share data in Thousands, unless otherwise specified
3 Months Ended 12 Months Ended 1 Months Ended
Sep. 30, 2014
Mar. 31, 2014
Jun. 30, 2013
Dec. 31, 2013
Dec. 31, 2014
Dec. 31, 2013
Dec. 31, 2012
Jan. 18, 2013
Revenue Recognition [Abstract]                
Milestone Revenue from Fuji   $ 1,000,000pgnx_MilestoneRevenueFromFuji            
Milestone Revenue from Salix 40,000,000pgnx_MilestoneRevenueFromSalix              
Accounts Receivable [Abstract]                
Allowance for Doubtful Accounts Receivable, Current       7,000us-gaap_AllowanceForDoubtfulAccountsReceivableCurrent 10,000us-gaap_AllowanceForDoubtfulAccountsReceivableCurrent 7,000us-gaap_AllowanceForDoubtfulAccountsReceivableCurrent    
Auction Rate Securities [Abstract]                
Auction rate securities       2,208,000us-gaap_AuctionRateSecuritiesNoncurrent 0us-gaap_AuctionRateSecuritiesNoncurrent 2,208,000us-gaap_AuctionRateSecuritiesNoncurrent    
Decrease in temporary impairment of auction rate securities         192,000pgnx_DecreaseInTemporaryImpairmentOfInvestments      
Goodwill and indefinite lived in-process research and development [Abstract]                
Goodwill       7,702,000us-gaap_Goodwill 7,702,000us-gaap_Goodwill 7,702,000us-gaap_Goodwill 0us-gaap_Goodwill  
Goodwill, Acquired During Period           7,702,000us-gaap_GoodwillAcquiredDuringPeriod    
Intangible Assets Acquired During Period           32,300,000pgnx_IntangibleAssetsAcquiredDuringPeriod    
Indefinite-Lived Intangible Assets (Excluding Goodwill)       31,360,000us-gaap_IndefiniteLivedIntangibleAssetsExcludingGoodwill 28,700,000us-gaap_IndefiniteLivedIntangibleAssetsExcludingGoodwill 31,360,000us-gaap_IndefiniteLivedIntangibleAssetsExcludingGoodwill 0us-gaap_IndefiniteLivedIntangibleAssetsExcludingGoodwill  
Reclassification to finite lived in-process research and development           (21,000)pgnx_ReclassificationToFiniteLivedInProcessResearchAndDevelopment    
Impairment of Intangible Assets, Indefinite-lived (Excluding Goodwill) 560,000us-gaap_ImpairmentOfIntangibleAssetsIndefinitelivedExcludingGoodwill       (2,660,000)us-gaap_ImpairmentOfIntangibleAssetsIndefinitelivedExcludingGoodwill (919,000)us-gaap_ImpairmentOfIntangibleAssetsIndefinitelivedExcludingGoodwill    
Beginning of significant cash inflows - year         2024 2021    
Finite-lived Intangible Assets [Roll Forward]                
Finite-Lived Intangible Assets, Net   19,000us-gaap_FiniteLivedIntangibleAssetsNet     19,000us-gaap_FiniteLivedIntangibleAssetsNet 0us-gaap_FiniteLivedIntangibleAssetsNet   0us-gaap_FiniteLivedIntangibleAssetsNet
Reclassification to finite lived in-process research and development           21,000pgnx_ReclassificationToFiniteLivedInProcessResearchAndDevelopment    
Amortization of Intangible Assets       (2,000)us-gaap_AmortizationOfIntangibleAssets (3,000)us-gaap_AmortizationOfIntangibleAssets (2,000)us-gaap_AmortizationOfIntangibleAssets    
Impairment of Intangible Assets, Finite-lived (16,000)us-gaap_ImpairmentOfIntangibleAssetsFinitelived       (16,000)us-gaap_ImpairmentOfIntangibleAssetsFinitelived      
Finite-Lived Intangible Assets, Net       19,000us-gaap_FiniteLivedIntangibleAssetsNet 0us-gaap_FiniteLivedIntangibleAssetsNet 19,000us-gaap_FiniteLivedIntangibleAssetsNet 0us-gaap_FiniteLivedIntangibleAssetsNet  
Finite-Lived Intangible Assets                
Onalta Indefinite Lived IPR&D Impairment 560,000us-gaap_ImpairmentOfIntangibleAssetsIndefinitelivedExcludingGoodwill       (2,660,000)us-gaap_ImpairmentOfIntangibleAssetsIndefinitelivedExcludingGoodwill (919,000)us-gaap_ImpairmentOfIntangibleAssetsIndefinitelivedExcludingGoodwill    
Onalta Finite Lived IPR&D Impairment 16,000us-gaap_ImpairmentOfIntangibleAssetsFinitelived       16,000us-gaap_ImpairmentOfIntangibleAssetsFinitelived      
Finite-Lived Intangible Assets, Gross       21,000us-gaap_FiniteLivedIntangibleAssetsGross   21,000us-gaap_FiniteLivedIntangibleAssetsGross    
Finite-Lived Intangible Assets, Accumulated Amortization       2,000us-gaap_FiniteLivedIntangibleAssetsAccumulatedAmortization   2,000us-gaap_FiniteLivedIntangibleAssetsAccumulatedAmortization    
Finite-Lived Intangible Assets, Net, Total       19,000us-gaap_FiniteLivedIntangibleAssetsNet 0us-gaap_FiniteLivedIntangibleAssetsNet 19,000us-gaap_FiniteLivedIntangibleAssetsNet 0us-gaap_FiniteLivedIntangibleAssetsNet  
Finite-Lived Intangible Asset, Useful Life           5 years    
Amortization of Intangible Assets       2,000us-gaap_AmortizationOfIntangibleAssets 3,000us-gaap_AmortizationOfIntangibleAssets 2,000us-gaap_AmortizationOfIntangibleAssets    
Fair Value Measurements [Abstract]                
Contingent consideration liability       15,700,000us-gaap_BusinessCombinationContingentConsiderationLiabilityNoncurrent 17,200,000us-gaap_BusinessCombinationContingentConsiderationLiabilityNoncurrent 15,700,000us-gaap_BusinessCombinationContingentConsiderationLiabilityNoncurrent   15,900,000us-gaap_BusinessCombinationContingentConsiderationLiabilityNoncurrent
Period of milestone achievement - Minimum         2018      
Period of milestone achievement - Maximum         2026      
Beginning of significant cash inflows - year         2024 2021    
Discount rate - milestone-based         10.00%pgnx_DiscountRateMilestoneBased      
Discount Rate - net sales targets         3.50%pgnx_DiscountRateNetSalesTargets      
Discount rate increase resulting in impairment of the remaining book value of MIP-1095         0.135%pgnx_DiscountRateIncreaseResultingInImpairmentOfTheRemainingBookValueOfMIP1095      
Probability of success decrease resulting in impairment of the remaining book value of MIP-1095         0.194%pgnx_ProbabilityOfSuccessDecreaseResultingInImpairmentOfTheRemainingBookValueOfMIP1095      
Indefinite lived intangible assets - Discount Rate         13.50%pgnx_IndefiniteLivedIntangibleAssetsDiscountRate 20.00%pgnx_IndefiniteLivedIntangibleAssetsDiscountRate    
Business Combination, Contingent Consideration Arrangements, Change in Amount of Contingent Consideration, Liability         1,500,000us-gaap_BusinessCombinationContingentConsiderationArrangementsChangeInAmountOfContingentConsiderationLiability1 (200,000)us-gaap_BusinessCombinationContingentConsiderationArrangementsChangeInAmountOfContingentConsiderationLiability1 0us-gaap_BusinessCombinationContingentConsiderationArrangementsChangeInAmountOfContingentConsiderationLiability1  
Intangible impairment charge         2,676,000us-gaap_ImpairmentOfIntangibleAssetsExcludingGoodwill 919,000us-gaap_ImpairmentOfIntangibleAssetsExcludingGoodwill 0us-gaap_ImpairmentOfIntangibleAssetsExcludingGoodwill  
Other current assets       1,943,000us-gaap_OtherAssetsCurrent 2,515,000us-gaap_OtherAssetsCurrent 1,943,000us-gaap_OtherAssetsCurrent    
Restricted cash       157,000us-gaap_RestrictedCashAndCashEquivalents 157,000us-gaap_RestrictedCashAndCashEquivalents 157,000us-gaap_RestrictedCashAndCashEquivalents    
Other Asset Impairment Charges     347,000us-gaap_OtherAssetImpairmentCharges          
Deferred Lease Liability and Incentive [Abstract]                
Deferred lease incentive - current       115,000pgnx_CurrentLeaseIncentivePayable 115,000pgnx_CurrentLeaseIncentivePayable 115,000pgnx_CurrentLeaseIncentivePayable    
Total other current liabilities       115,000us-gaap_OtherLiabilitiesCurrent 115,000us-gaap_OtherLiabilitiesCurrent 115,000us-gaap_OtherLiabilitiesCurrent    
Deferred lease liability       224,000us-gaap_DeferredRevenueLeasesNetNoncurrent 336,000us-gaap_DeferredRevenueLeasesNetNoncurrent 224,000us-gaap_DeferredRevenueLeasesNetNoncurrent    
Deferred lease incentive - noncurrent       690,000pgnx_LeaseIncentivePayableNoncurrent 575,000pgnx_LeaseIncentivePayableNoncurrent 690,000pgnx_LeaseIncentivePayableNoncurrent    
Total other liabilities       914,000us-gaap_OtherLiabilitiesNoncurrent 911,000us-gaap_OtherLiabilitiesNoncurrent 914,000us-gaap_OtherLiabilitiesNoncurrent    
Income Taxes [Abstract]                
Percentage of income tax benefit realization (in hundredths)         50.00%pgnx_PercentageOfRealizationOfIncomeTaxBenefitsMinimum      
Computer Equipment [Member]                
Estimated useful lives of fixed assets [Abstract]                
Estimated useful life         3 years      
Furniture and Fixtures [Member]                
Estimated useful lives of fixed assets [Abstract]                
Estimated useful life         5 years      
Leasehold Improvements [Member]                
Estimated useful lives of fixed assets [Abstract]                
Useful life description         Earlier of life of improvement or lease      
Minimum [Member] | Machinery and Equipment [Member]                
Estimated useful lives of fixed assets [Abstract]                
Estimated useful life         5 years      
Minimum [Member] | Leasehold Improvements [Member]                
Estimated useful lives of fixed assets [Abstract]                
Estimated useful life         6 years 4 months 24 days 8 years 6 months    
Maximum [Member] | Machinery and Equipment [Member]                
Estimated useful lives of fixed assets [Abstract]                
Estimated useful life         7 years      
Maximum [Member] | Leasehold Improvements [Member]                
Estimated useful lives of fixed assets [Abstract]                
Estimated useful life         10 years 9 months 18 days 10 years 9 months 18 days    
Auction Rate Securities [Member]                
Auction Rate Securities [Abstract]                
Auction rate securities       2,208,000us-gaap_AuctionRateSecuritiesNoncurrent
/ us-gaap_FairValueByAssetClassAxis
= us-gaap_AuctionRateSecuritiesMember
  2,208,000us-gaap_AuctionRateSecuritiesNoncurrent
/ us-gaap_FairValueByAssetClassAxis
= us-gaap_AuctionRateSecuritiesMember
   
Azedra commercialization [Member]                
Goodwill and indefinite lived in-process research and development [Abstract]                
Fair Value               4,900,000us-gaap_AssetsFairValueDisclosure
/ us-gaap_FairValueByAssetClassAxis
= pgnx_AzedraCommercializationMember
Discount rate               15.00%us-gaap_FairValueInputsDiscountRate
/ us-gaap_FairValueByAssetClassAxis
= pgnx_AzedraCommercializationMember
Beginning of significant cash inflows - year               2017
Fair Value Measurements [Abstract]                
Beginning of significant cash inflows - year               2017
MIP - 1404 commercialization [Member]                
Goodwill and indefinite lived in-process research and development [Abstract]                
Fair Value               23,200,000us-gaap_AssetsFairValueDisclosure
/ us-gaap_FairValueByAssetClassAxis
= pgnx_Mip1404CommercializationMember
Discount rate               18.00%us-gaap_FairValueInputsDiscountRate
/ us-gaap_FairValueByAssetClassAxis
= pgnx_Mip1404CommercializationMember
Beginning of significant cash inflows - year               2017
Fair Value Measurements [Abstract]                
Beginning of significant cash inflows - year               2017
MIP-1095 commercialization [Member]                
Goodwill and indefinite lived in-process research and development [Abstract]                
Fair Value               2,700,000us-gaap_AssetsFairValueDisclosure
/ us-gaap_FairValueByAssetClassAxis
= pgnx_Mip1095CommercializationMember
Discount rate               20.00%us-gaap_FairValueInputsDiscountRate
/ us-gaap_FairValueByAssetClassAxis
= pgnx_Mip1095CommercializationMember
Beginning of significant cash inflows - year               2021
Fair Value Measurements [Abstract]                
Beginning of significant cash inflows - year               2021
Onalta [Member]                
Goodwill and indefinite lived in-process research and development [Abstract]                
Fair Value               1,500,000us-gaap_AssetsFairValueDisclosure
/ us-gaap_FairValueByAssetClassAxis
= pgnx_OnaltaMember
Discount rate               15.00%us-gaap_FairValueInputsDiscountRate
/ us-gaap_FairValueByAssetClassAxis
= pgnx_OnaltaMember
Beginning of significant cash inflows - year               2014
Fair Value Measurements [Abstract]                
Beginning of significant cash inflows - year               2014
Money Market Funds [Member]                
Cash and Cash Equivalents [Line Items]                
Cash equivalents       60,364,000us-gaap_CashEquivalentsAtCarryingValue
/ us-gaap_CashAndCashEquivalentsAxis
= us-gaap_MoneyMarketFundsMember
112,808,000us-gaap_CashEquivalentsAtCarryingValue
/ us-gaap_CashAndCashEquivalentsAxis
= us-gaap_MoneyMarketFundsMember
60,364,000us-gaap_CashEquivalentsAtCarryingValue
/ us-gaap_CashAndCashEquivalentsAxis
= us-gaap_MoneyMarketFundsMember
   
Commercial Bank [Member]                
Cash and Cash Equivalents [Line Items]                
Cash equivalents       5,496,000us-gaap_CashEquivalentsAtCarryingValue
/ us-gaap_CashAndCashEquivalentsAxis
= us-gaap_BankTimeDepositsMember
6,494,000us-gaap_CashEquivalentsAtCarryingValue
/ us-gaap_CashAndCashEquivalentsAxis
= us-gaap_BankTimeDepositsMember
5,496,000us-gaap_CashEquivalentsAtCarryingValue
/ us-gaap_CashAndCashEquivalentsAxis
= us-gaap_BankTimeDepositsMember
   
Restricted Stock [Member]                
Shares of unvested restricted stock outstanding (in shares) [Line Items]                
Shares of unvested restricted stock outstanding (in shares)             28us-gaap_ShareBasedCompensationArrangementByShareBasedPaymentAwardEquityInstrumentsOtherThanOptionsNonvestedNumber
/ us-gaap_AwardTypeAxis
= us-gaap_RestrictedStockMember
 
Salix Agreement [Member]                
Revenue Recognition [Abstract]                
Upfront license fee, received           60,000,000us-gaap_ProceedsFromLicenseFeesReceived
/ pgnx_CollaborativeAndNonCollaborativeArrangementsAxis
= pgnx_SalixAgreementMember
   
MedImmune Agreement [Member]                
Revenue Recognition [Abstract]                
Upfront license fee, received         5,000,000us-gaap_ProceedsFromLicenseFeesReceived
/ pgnx_CollaborativeAndNonCollaborativeArrangementsAxis
= pgnx_MedimmuneAgreementMember
     
CytoDyn Agreement [Member]                
Revenue Recognition [Abstract]                
Upfront license fee, received           3,500,000us-gaap_ProceedsFromLicenseFeesReceived
/ pgnx_CollaborativeAndNonCollaborativeArrangementsAxis
= pgnx_CytodynAgreementMember
   
Onalta Agreement [Member]                
Revenue Recognition [Abstract]                
Upfront license fee, received           $ 200,000us-gaap_ProceedsFromLicenseFeesReceived
/ pgnx_CollaborativeAndNonCollaborativeArrangementsAxis
= pgnx_OnaltaAgreementMember