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CONDENSED CONSOLIDATED STATEMENTS OF CASH FLOWS (USD $)
In Thousands, unless otherwise specified
3 Months Ended
Mar. 31, 2014
Mar. 31, 2013
Cash flows from operating activities:    
Net loss $ (7,102) $ (3,895)
Adjustments to reconcile net loss to net cash used in operating activities:    
Depreciation and amortization 162 650
Amortization of premium/discount on purchased securities 664 681
Write-down of inventory to net realizable value 1,437  
Non-cash equity-based compensation expense 1,930 2,283
Amortization of debt discount and debt issuance costs 851  
Gains on sale of assets (100) (299)
Gains on investments, net   (6)
Change in fair value of contingent consideration 789  
Changes in operating assets and liabilities:    
Accounts receivable, net (3,273) (2,109)
Inventories (2,521) 1,834
Receivable from collaboration 76 155
Prepaid and other current assets (1,014) (6)
Other long-term assets 885  
Accounts payable and accrued expenses (1,101) (7,074)
Deferred revenues (3,075) (1,816)
Other long-term liabilities 318 (111)
Total adjustments (3,972) (5,818)
Net cash used in operating activities (11,074) (9,713)
Cash flows from investing activities:    
Proceeds from sales or maturities of investments 26,706 30,663
Purchase of investments (25,046) (33,906)
Proceeds from sale of assets 100 368
Capital expenditures (124) (23)
Change in restricted cash 2,883  
Net cash provided by (used in) investing activities 4,519 (2,898)
Cash flows from financing activities:    
Payment of contingent consideration (31)  
Proceeds from issuance of convertible debt 200,000  
Payment of debt issuance costs (6,361)  
Proceeds from issuance of warrants 25,620  
Purchase of convertible bond hedges (39,760)  
Proceeds from the exercise of stock options 1,017 163
Net cash provided by financing activities 180,485 163
Net increase (decrease) in cash and cash equivalents 173,930 (12,448)
Cash and cash equivalents at beginning of the period 26,986 46,293
Cash and cash equivalents at end of the period $ 200,916 $ 33,845