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Income Taxes (Tables)
12 Months Ended
Dec. 31, 2012
Income Taxes  
Schedule of reconciliation of the statutory U.S. federal income tax rate to the entity's effective income tax rate

  Years Ended December 31,  
 
  2012   2011   2010  

Statutory U.S. federal tax rate

    (34.0 )%   (34.0 )%   (34.0 )%

State taxes, net of federal benefit

    4.2 %   (3.4 )%   (5.8 )%

Equity-based compensation expense

    42.4 %   2.4 %   1.7 %

Permanent items, net

    1.2 %   0.4 %   0.5 %

Tax credits

    0.8 %   (1.6 )%   (2.2 )%

Valuation allowance

    (19.5 )%   34.7 %   39.2 %
               

Total tax (benefit) expense

    (4.9 )%   (1.5 )%   (0.6 )%
               
Schedule of components of the entity's deferred tax assets and liabilities

The components of our deferred tax assets and liabilities are as follows (in thousands):

 
  December 31,  
 
  2012   2011  

Assets

             

Net operating loss carryforwards

  $ 75,740   $ 75,738  

Tax credit carryforwards

    12,403     12,560  

Deferred revenue

    22,315     19,321  

Equity-based compensation expense

    3,681     10,331  

Capitalized research & development

    45,137     43,463  

Other

    4,239     6,406  

Property, Plant, and Equipment Depreciation

    1,393      

Liabilities

             

Property, Plant, and Equipment Depreciation

        (130 )
           

 

    164,908     167,689  

Valuation allowance

    (164,908 )   (167,689 )
           

Net deferred taxes

  $   $