0001110803-12-000101.txt : 20120423 0001110803-12-000101.hdr.sgml : 20120423 20120423161050 ACCESSION NUMBER: 0001110803-12-000101 CONFORMED SUBMISSION TYPE: 8-K PUBLIC DOCUMENT COUNT: 2 CONFORMED PERIOD OF REPORT: 20120423 ITEM INFORMATION: Results of Operations and Financial Condition ITEM INFORMATION: Submission of Matters to a Vote of Security Holders ITEM INFORMATION: Financial Statements and Exhibits FILED AS OF DATE: 20120423 DATE AS OF CHANGE: 20120423 FILER: COMPANY DATA: COMPANY CONFORMED NAME: ILLUMINA INC CENTRAL INDEX KEY: 0001110803 STANDARD INDUSTRIAL CLASSIFICATION: LABORATORY ANALYTICAL INSTRUMENTS [3826] IRS NUMBER: 330804655 STATE OF INCORPORATION: DE FISCAL YEAR END: 0103 FILING VALUES: FORM TYPE: 8-K SEC ACT: 1934 Act SEC FILE NUMBER: 001-35406 FILM NUMBER: 12773460 BUSINESS ADDRESS: STREET 1: 9885 TOWNE CENTRE DRIVE CITY: SAN DIEGO STATE: CA ZIP: 92121 BUSINESS PHONE: 8582024500 MAIL ADDRESS: STREET 1: 9885 TOWNE CENTRE DRIVE CITY: SAN DIEGO STATE: CA ZIP: 92121 8-K 1 a1q128-k.htm FORM 8-K 1Q12 8-K


UNITED STATES

SECURITIES AND EXCHANGE COMMISSION
Washington, D.C. 20549
Form 8-K
Current Report

Pursuant to Section 13 or 15(d) of the Securities Exchange Act of 1934
Date of Report (Date of earliest event reported): April 18, 2012
Illumina, Inc.
(Exact name of registrant as specified in its charter)
001-35406

(Commission File Number)
 
 
 
 
 
 
Delaware
 
33-0804655
(State or other jurisdiction of incorporation)
 
(I.R.S. Employer Identification No.)
5200 Illumina Way, San Diego, CA 92122

(Address of principal executive offices) (Zip code)
(858) 202-4500

(Registrant’s telephone number, including area code)
N/A

(Former name or former address, if changed since last report)
Check the appropriate box below if the Form 8-K filing is intended to simultaneously satisfy the filing obligation of the registrant under any of the following provisions:
o     Written communications pursuant to Rule 425 under the Securities Act (17 CFR 230.425)
o     Soliciting material pursuant to Rule 14a-12 under the Exchange Act (17 CFR 240.14a-12)
o     Pre-commencement communications pursuant to Rule 14d-2(b) under the Exchange Act (17 CFR 240.14d-2(b))
o     Pre-commencement communications pursuant to Rule 13e-4(c) under the Exchange Act (17 CFR 240.13e-4(c))






TABLE OF CONTENTS








Item 2.02 Results of Operations and Financial Condition.

On April 23, 2012, Illumina, Inc. (the "Company") issued a press release announcing financial results for the three months ended April 1, 2012. The full text of the Company’s press release is attached hereto as Exhibit 99.1.

This Form 8-K, including the exhibit hereto, is being furnished to the Securities and Exchange Commission and shall not be deemed to be “filed” for purposes of Section 18 of, or otherwise regarded as “filed” under, the Securities Exchange Act of 1934, as amended. The information in this report shall not be incorporated by reference into any filing of Illumina, Inc. with the Securities and Exchange Commission, whether made before, on or after the date hereof, regardless of any general incorporation language in such filing.







Item 5.07 Submission of Matters to a Vote of Security Holders.

The Company's 2012 annual meeting of stockholders (the “Annual Meeting”) was held on April 18, 2012, at which the Company's stockholders voted upon and approved the following proposals:

1.
The election of each of the following individuals nominated by the Company to serve as a director and hold office for three years until the 2015 annual meeting of stockholders of the Company:

A. Blaine Bowman;
Karin Eastham;
Jay T. Flatley; and
William H. Rastetter

2.
The ratification of the appointment of Ernst & Young LLP as the Company's independent registered public accounting firm for the fiscal year ending December 30, 2012; and

3.
On an advisory basis, the compensation paid to the Company's “named executive officers” as disclosed in the Company's Proxy Statement for the Annual Meeting.

At the Annual Meeting, the Company's stockholders did not elect any of the following individuals nominated by CKH Acquisition Corporation (“Roche”), an indirect, wholly-owned subsidiary of Roche Holding Ltd., to serve as a director and hold office for three years until the 2015 annual meeting of stockholders of the Company:

Bary Bailey;
Dwight Crane;
Michael Griffith; or
Jay Hunt

In addition, the Company's stockholders rejected the following proposals at the Annual Meeting:

4.
Roche's proposal to amend the Company's bylaws to increase the number of directors on the Company's Board of Directors (the “Board of Directors”);

5.
Roche's proposal to amend the Company's bylaws to require that newly created directorships be filled only by a stockholder vote;

6.
Roche's proposal to fill the two newly created directorships with its nominees, if Proposal 4 was approved; and

7.
Roche's proposal to repeal any bylaw amendments adopted by the Board of Directors without stockholder approval after April 22, 2010.

According to preliminary results provided by the independent inspector of elections, stockholders present in person or by proxy, representing 100,973,936 shares of the Company's common stock voted on each proposal presented as follows:







Proposal 1
Votes regarding the election of four director nominees were:
 
For
Withheld
Broker Non-Votes
Illumina Nominees:
 
 
 
A. Blaine Bowman
92,138,076
172,570
Karin Eastham
91,980,546
330,100
Jay T. Flatley
92,142,501
168,145
William H. Rastetter
91,990,678
319,968
 
 
 
 
Roche Nominees:
 
 
 
Bary Bailey
7,333,041
1,330,249
Dwight Crane
7,332,947
1,330,343
Michael Griffith
7,333,041
1,330,249
Jay Hunt
7,333,447
1,329,843

Proposal 2
Votes regarding the ratification of the appointment of Ernst & Young LLP as the Company's independent registered public accounting firm for the fiscal year ending December 30, 2012 were:
For
Against
Abstain
Broker Non-Votes
95,528,778
214,163
5,227,690

Proposal 3
Votes regarding the approval, on an advisory basis, of the compensation paid to the Company's “named executive officers” as disclosed in the Company's Proxy Statement for the Annual Meeting were:
For
Against
Abstain
Broker Non-Votes
88,071,422
7,372,600
5,526,609

Proposal 4
Votes regarding Roche's proposal to amend the Company's bylaws to increase the number of directors on the Board of Directors were:
For
Against
Abstain
Broker Non-Votes
9,250,824
91,185,921
537,191

Proposal 5
Votes regarding Roche's proposal to amend the Company's bylaws to require that newly created directorships be filled only by a stockholder vote were:
For
Against
Abstain
Broker Non-Votes
9,150,674
91,250,634
572,628

Proposal 6
Votes regarding Roche's proposal to fill the two newly created directorships with its nominees, if Proposal 4 was approved, were:
 
For
Withheld
Broker Non-Votes
Earl (Duke) Collier, Jr.
9,876,869
91,097,067
David Dodd
9,875,898
91,098,038

Proposal 7
Votes regarding Roche's proposal to repeal any bylaw amendments adopted by the Board of Directors without stockholder approval after April 22, 2010 were:
For
Against
Abstain
Broker Non-Votes
9,321,096
91,099,896
552,944






If the final results, as certified by the independent inspector of elections, differ from the foregoing preliminary results, the Company will report the final results in an amendment to this Form 8-K.







Item 9.01 Financial Statements and Exhibits.

(d) Exhibits.

99.1    Press release dated April 23, 2012 announcing Illumina, Inc.’s financial results for the first quarter ended April 1, 2012.







SIGNATURES

Pursuant to the requirements of the Securities Exchange Act of 1934, the Registrant has duly caused this report to be signed on its behalf by the undersigned hereunto duly authorized.

 
 
 
 
 
ILLUMINA, INC.
 
Date: April 23, 2012 
By:  
/s/ Marc A. Stapley
 
 
Marc A. Stapley
 
 
Senior Vice President and Chief Financial Officer 







Exhibit Index

Exhibit Number
 
Description
99.1

 
Press release dated April 23, 2012 announcing Illumina, Inc.’s financial results for the three months ended April 1, 2012.


EX-99.1 2 ex9911q12earningspressrele.htm Q1 2012 EARNINGS PRESS RELEASE EX 99.1 1Q12 Earnings Press Release


Exhibit 99.1

Illumina Reports Financial Results for First Quarter of Fiscal Year 2012

Announces $250 Million Share Repurchase Program

SAN DIEGO -- (BUSINESS WIRE) - April 23, 2012 - Illumina, Inc. (NASDAQ:ILMN) today announced its financial results for the first quarter of 2012.

First quarter 2012 results:
Revenue of $273 million, a 3% decrease compared to $283 million in the first quarter of 2011.
GAAP net income for the quarter of $26 million, or $0.20 per diluted share, compared to net income of $24 million, or $0.16 per diluted share, for the first quarter of 2011.
Non-GAAP net income for the quarter of $48 million, or $0.36 per diluted share, compared to $50 million, or $0.35 per diluted share, for the first quarter of 2011 (see the table entitled "Itemized Reconciliation Between GAAP and Non-GAAP Net Income" for a reconciliation of these GAAP and non-GAAP financial measures).

Gross margin in the first quarter of 2012 was 66.4% compared to 66.6% in the prior year period. Excluding the effect of non-cash charges associated with stock compensation, amortization of acquired intangibles, and legal contingencies, non-GAAP gross margin was 69.0% for the first quarter of 2012 compared to 68.2% in the prior year period.

Research and development (R&D) expenses for the first quarter of 2012 were $48.8 million compared to $50.2 million in the first quarter of 2011. R&D expenses included $7.4 million and $7.7 million of non-cash stock compensation expense in the first quarters of 2012 and 2011, respectively. Excluding these charges and contingent compensation expense, R&D expenses as a percentage of revenue were 14.9% compared to 14.5% in the prior year period.

Selling, general and administrative (SG&A) expenses for the first quarter of 2012 were $68.0 million compared to $65.7 million for the first quarter of 2011. SG&A expenses included $13.8 million and $12.6 million of non-cash stock compensation expense in the first quarters of 2012 and 2011, respectively. Excluding these charges, contingent compensation expense, and acquired intangible asset amortization, SG&A expenses as a percentage of revenue were 18.9% compared to 18.5% in the prior year period.

The company generated $65 million in cash flow from operations during the first quarter of 2012 compared to $89 million in the prior year period. Depreciation and amortization expenses were $15.2 million and capital expenditures were $13.1 million during the first quarter of 2012. The company ended the first quarter of





2012 with $1.3 billion in cash, cash equivalents and short-term investments compared to $1.2 billion as of January 1, 2012.

Share Repurchase Program
Illumina also announced today that on April 18, 2012, its Board of Directors authorized the Company to repurchase up to $250 million of its outstanding common shares.

"We believe that the repurchase of our common stock represents an effective use of our capital and underscores our commitment to maximize value for our shareholders," said Illumina's Marc Stapley, Senior Vice President and Chief Financial Officer. "Since 2008, we have bought over 19 million shares of our common stock through prior authorizations, returning over $860 million to shareholders, including shares repurchased in conjunction with our 2016 convertible debt offering. Through the Board's new authorization, we expect to continue our share repurchase programs."

Highlights since our last earnings release
Announced that the company's stockholders supported all of the company's proposals at its Annual Meeting of Stockholders.
Announced the TruSeq® Amplicon - Cancer Panel for MiSeq® system, a research use only, highly multiplexed panel with the ability to sequence hundreds of the most relevant cancer loci.
Launched the Cancer Analysis Service from the Illumina Genome Network (IGN) which delivers the most accurate data for comprehensive cancer studies at the lowest sample input volume of any commercial whole human genome sequencing service (5µg).
Announced that the Broad Institute joined the Illumina Genome Network to offer its proprietary sample preparation processes for whole human genome sequencing, enabling low input DNA (<500ng) and FFPE samples.
Announced a favorable Patent Claim Construction ruling in litigation against Complete Genomics, Inc.
Announced that Macrogen, Inc., a global sequencing services company based in Korea, purchased an additional 10 HiSeq 2000 systems and two MiSeq systems, as well as HiSeq 2500 upgrades.

Financial outlook and guidance

"We are pleased with our financial performance for the first quarter of 2012," said Illumina's President and Chief Executive Officer Jay Flatley. "While some uncertainty exists with respect to academic and research funding in the second half of the year, we have built backlog for the 3rd consecutive quarter and our full-year outlook is generally as we anticipated. Accordingly, we are re-affirming our 2012 guidance."

Quarterly conference call information

The conference call will begin at 2:00 pm Pacific Time (5:00 pm Eastern Time) on Monday, April 23, 2012.





Interested parties may listen to the call by dialing 888-679-8038 (passcode: 40633465), or if outside North America by dialing +1-617-213-4850 (passcode: 40633465). Individuals may access the live teleconference in the Investor Relations section of Illumina's web site under the “Company” tab at www.illumina.com.

A replay of the conference call will be available from 4:00 pm Pacific Time (7:00 pm Eastern Time) on April 23, 2012 through April 20, 2012 by dialing 888-286-8010 (passcode: 55576523), or if outside North America by dialing +1-617-801-6888 (passcode: 55576523).

Statement regarding use of non-GAAP financial measures

The company reports non-GAAP results for diluted net income per share, net income, gross margins, operating expenses, operating margins, other income, and free cash flow in addition to, and not as a substitute for, or superior to, financial measures calculated in accordance with GAAP.

The company's financial measures under GAAP include substantial charges related to stock compensation expense, non-cash interest expense associated with the company's convertible debt instruments that may be settled in cash, costs incurred for unsolicited tender offer, amortization expense related to acquired intangible assets, contingent compensation expense, restructuring charges, legal contingencies, headquarter relocation expense, loss on the extinguishment of convertible debt, and acquisition related expense. Per share amounts also include the double dilution associated with the accounting treatment of the company's 0.625% convertible senior notes outstanding and the corresponding call option overlay. Management believes that presentation of operating results that excludes these items and per share double dilution provides useful supplemental information to investors and facilitates the analysis of the company's core operating results and comparison of operating results across reporting periods. Management also believes that this supplemental non-GAAP information is therefore useful to investors in analyzing and assessing the company's past and future operating performance.

The company encourages investors to carefully consider its results under GAAP, as well as its supplemental non-GAAP information and the reconciliation between these presentations, to more fully understand its business. Reconciliations between GAAP and non-GAAP results are presented in the tables of this release.

Use of forward looking statements

This release contains projections, information about our financial outlook, earnings guidance, and other forward-looking statements that involve risks and uncertainties. These forward-looking statements are based on our expectations as of the date of this release and may differ materially from actual future events or results. Among the important factors that could cause actual results to differ materially from those in any forward-looking statements are (i) our ability to develop and commercialize further our sequencing, array, PCR, and consumables technologies and to deploy new products and applications, and expand the markets,





for our technology platforms; (ii) our ability to manufacture robust instrumentation and consumables; (iii) our expectations and beliefs regarding future conduct and growth of the business and the markets in which we operate; (iv) challenges inherent in developing, manufacturing, and launching new products and services; (v) our ability to maintain our revenue and profitability during periods of research funding reduction or uncertainty and adverse economic and business conditions, including as a result of slowing economic growth in the United States or worldwide, together with other factors detailed in our filings with the Securities and Exchange Commission, including our most recent filings on Forms 10-K and 10-Q, or in information disclosed in public conference calls, the date and time of which are released beforehand. We undertake no obligation, and do not intend, to update these forward-looking statements, to review or confirm analysts' expectations, or to provide interim reports or updates on the progress of the current financial quarter.

About Illumina

Illumina (www.illumina.com) is a leading developer, manufacturer, and marketer of life science tools and integrated systems for the analysis of genetic variation and function. We provide innovative sequencing and array-based solutions for genotyping, copy number variation analysis, methylation studies, gene expression profiling, and low-multiplex analysis of DNA, RNA, and protein. We also provide tools and services that are fueling advances in consumer genomics and diagnostics. Our technology and products accelerate genetic analysis research and its application, paving the way for molecular medicine and ultimately transforming healthcare.


# # #

Investors:
Kevin Williams, MD
Investor Relations
858-332-4989
kwilliams@illumina.com
or
Media:
Jennifer Temple
Public Relations
858-246-8816
PR@illumina.com







Illumina, Inc.
Condensed Consolidated Balance Sheets
(In thousands)
 
 
 
 
 
 
 
 
 
April 1,
2012
 
January 1,
2012
ASSETS
 
(unaudited)
 
 
Current assets:
 
 
 
 
 
Cash and cash equivalents
 
$
260,194

 
$
302,978

 
Short-term investments
 
1,006,169

 
886,590

 
Accounts receivable, net
 
202,234

 
173,886

 
Inventory, net
 
128,684

 
128,781

 
Deferred tax assets, current portion
 
22,692

 
23,188

 
Prepaid expenses and other current assets
 
17,318

 
29,196

 
          Total current assets
 
1,637,291

 
1,544,619

Property and equipment, net
 
143,494

 
143,483

Goodwill
 
321,853

 
321,853

Intangible assets, net
 
103,007

 
106,475

Deferred tax assets, long-term portion
 
26,479

 
19,675

Other assets
 
69,350

 
59,735

 
          Total assets
 
$
2,301,474

 
$
2,195,840

 
 
 
 
 
 
LIABILITIES AND STOCKHOLDERS’ EQUITY
Current liabilities:
 
 
 
 
 
Accounts payable
 
$
59,861

 
$
49,806

 
Accrued liabilities
 
198,040

 
187,774

 
Long-term debt, current portion
 
35,025

 

 
          Total current liabilities
 
292,926

 
237,580

Long-term debt
 
780,943

 
807,369

Other long-term liabilities
 
62,333

 
69,954

Conversion option subject to cash settlement
 
5,100

 
5,722

Stockholders’ equity
 
1,160,172

 
1,075,215

 
          Total liabilities and stockholders’ equity
 
$
2,301,474

 
$
2,195,840








Illumina, Inc.
Condensed Consolidated Statements of Income
(In thousands, except per share amounts)
(unaudited)
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Three Months Ended
 
 
 
 
 
 
April 1, 2012
 
April 3,
2011
 
Revenue:
 
 
 
 
 
 
Product revenue
 
$
255,636

 
$
266,717

 
 
Service and other revenue
 
17,134

 
15,798

 
 
 
Total revenue
 
272,770

 
282,515

 
Cost of Revenue:
 
 
 
 
 
 
Cost of product revenue (a)
 
80,151

 
85,437

 
 
Cost of service and other revenue (a)
 
8,565

 
6,052

 
 
Amortization of acquired intangible assets
 
3,043

 
2,985

 
 
 
Total cost of revenue
 
91,759

 
94,474

 
 
 
 
Gross profit
 
181,011

 
188,041

 
Operating Expenses:
 
 
 
 
 
 
Research and development (a)
 
48,839

 
50,200

 
 
Selling, general and administrative (a)
 
67,969

 
65,661

 
 
Unsolicited tender offer related expense
 
8,092

 

 
 
Restructuring charges
 
2,622

 

 
 
Headquarter relocation expense
 
2,140

 
2,522

 
 
Acquisition related expense
 
1,737

 
270

 
 
 
Total operating expenses
 
131,399

 
118,653

 
 
 
 
Income from operations
 
49,612

 
69,388

 
 
Other expense, net
 
(9,339
)
 
(33,380
)
 
 
 
 
Income before income taxes
 
40,273

 
36,008

 
Provision for income taxes
 
14,071

 
11,871

 
 
 
 
Net income
 
$
26,202

 
$
24,137

 
Net income per basic share
 
$
0.21

 
$
0.19

 
Net income per diluted share
 
$
0.20

 
$
0.16

 
Shares used in calculating basic net income per share
 
122,642

 
126,517

 
Shares used in calculating diluted net income per share
 
133,859

 
153,129

 
 
 
 
 
 
 
 
 
 
(a) Includes total stock-based compensation expense for stock based awards:
 
 
 
 
 
 
 
 
 
 
Three Months Ended
 
 
 
 
 
 
April 1, 2012
 
April 3,
2011
 
 
Cost of product revenue
 
$
1,812

 
$
1,512

 
 
Cost of service and other revenue
 
17

 
210

 
 
Research and development
 
7,427

 
7,728

 
 
Selling, general and administrative
 
13,773

 
12,589

 
 
 
Stock-based compensation expense before taxes
 
$
23,029

 
$
22,039

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 







Illumina, Inc.
Condensed Consolidated Statements of Cash Flows
(In thousands)
(unaudited)
 
 
 
 
 
 
 
 
Three Months Ended
 
 
 
April 1,
2012
 
April 3,
2011
 
Net cash provided by operating activities
 
$
65,440

 
$
88,578

 
Net cash used in investing activities
 
(141,870
)
 
(152,876
)
 
Net cash provided by financing activities
 
33,616

 
225,481

 
Effect of exchange rate changes on cash and cash equivalents
 
30

 
211

 
Net (decrease) increase in cash and cash equivalents
 
(42,784
)
 
161,394

 
Cash and cash equivalents, beginning of period
 
302,978

 
248,947

 
Cash and cash equivalents, end of period
 
$
260,194

 
$
410,341

 
 
 
 
 
 
 
Calculation of free cash flow (a):
 
 
 
 
 
Net cash provided by operating activities
 
$
65,440

 
$
88,578

 
Purchases of property and equipment
 
(13,084
)
 
(12,300
)
 
Free cash flow
 
$
52,356

 
$
76,278

 
 
 
 
 
 
 

(a) Free cash flow, which is a non-GAAP financial measure, is calculated as net cash provided by operating activities reduced by purchases of property and equipment. Free cash flow is useful to management as it is one of the metrics used to evaluate our performance and to compare us with other companies in our industry. However, our calculation of free cash flow may not be comparable to similar measures used by other companies.







Illumina, Inc.
Results of Operations - Non-GAAP
(In thousands, except per share amounts)
(unaudited)
 
ITEMIZED RECONCILIATION BETWEEN GAAP AND NON-GAAP NET INCOME PER SHARE:
 
 
 
 
 
 
 
 
Three Months Ended
 
 
 
April 1,
2012
 
April 3,
2011
 
GAAP net income per share - diluted
 
$
0.20

 
$
0.16

 
Pro forma impact of weighted average shares (a)
 

 
0.01

 
Adjustments to net income:
 
 
 
 
 
Non-cash interest expense (b)
 
0.07

 
0.05

 
Unsolicited tender offer related expense
 
0.06

 

 
Amortization of acquired intangible assets
 
0.02

 
0.02

 
Contingent compensation expense (c)
 
0.02

 
0.01

 
Restructuring charges
 
0.02

 

 
Legal contingencies
 
0.02

 

 
Headquarter relocation expense (d)
 
0.02

 
0.02

 
Acquisition related expense (e)
 
0.01

 

 
Loss on extinguishment of debt
 

 
0.19

 
Incremental non-GAAP tax expense (f)
 
(0.08
)
 
(0.11
)
 
Non-GAAP net income per share - diluted (g)
 
$
0.36

 
$
0.35

 
Shares used in calculating non-GAAP diluted net income per share
 
132,868

 
142,176

 
 
 
 
 
 
 
ITEMIZED RECONCILIATION BETWEEN GAAP AND NON-GAAP NET INCOME:
GAAP net income
 
$
26,202

 
$
24,137

 
Non-cash interest expense (b)
 
8,642

 
6,501

 
Unsolicited tender offer related expense
 
8,092

 

 
Amortization of acquired intangible assets
 
3,195

 
2,985

 
Contingent compensation expense (c)
 
3,092

 
2,124

 
Restructuring charges
 
2,622

 

 
Legal contingencies
 
2,223

 

 
Headquarter relocation expense (d)
 
2,140

 
2,522

 
Acquisition related expense (e)
 
1,737

 
270

 
Loss on extinguishment of debt
 

 
27,177

 
Incremental non-GAAP tax expense (f)
 
(10,393
)
 
(15,449
)
 
Non-GAAP net income (g)
 
$
47,552

 
$
50,267

 
 
 
 
 
 
 
ITEMIZED RECONCILIATION BETWEEN GAAP AND NON-GAAP DILUTED NUMBER OF SHARES:
Weighted average shares used in calculation of GAAP diluted net income per share
 
133,859

 
153,129

 
Weighted average dilutive potential common shares issuable of redeemable convertible senior notes (a)
 
(991
)
 
(10,953
)
 
Weighted average shares used in calculation of Non-GAAP diluted net income per share
 
132,868

 
142,176

 
 
 
 
 
 
 

(a) Pro forma impact of weighted average shares represents the impact of double dilution associated with the accounting treatment of the company's outstanding convertible debt and the corresponding call option overlay.

(b) Non-cash interest expense is calculated in accordance with the authoritative accounting guidance for convertible debt





instruments that may be settled in cash.

(c) Contingent compensation expense represents contingent consideration for post-combination services associated with acquisitions.

(d) Headquarter relocation expense in Q1 2012 consists primarily of accretion interest expense on lease exit liability recorded upon vacating certain buildings of our prior headquarters, double rent expense during the transition to our new headquarter facility, and moving costs. Headquarter relocation expense recorded in Q1 2011 consisted of accelerated depreciation.

(e) Acquisition related expense represents changes in fair value of contingent consideration.

(f) Incremental non-GAAP tax expense reflects the increase to GAAP tax expense related to the non-GAAP adjustments listed above.

(g) Non-GAAP net income per share and net income exclude the effect of the pro forma adjustments as detailed above. Non-GAAP diluted net income per share and net income are key drivers of our core operating performance and major factors in management's bonus compensation each year. Management has excluded the effects of these items in these measures to assist investors in analyzing and assessing our past and future core operating performance.







Illumina, Inc.
Results of Operations - Non-GAAP (continued)
(Dollars in thousands)
(unaudited)
ITEMIZED RECONCILIATION BETWEEN GAAP AND NON-GAAP RESULTS OF OPERATIONS AS A PERCENT OF REVENUE:
 
Three Months Ended
 
April 1,
2012
 
April 3,
2011
 
GAAP gross profit
$
181,011

 
66.4
 %
 
$
188,041

 
66.6
 %
 
Stock-based compensation expense
1,829

 
0.7
 %
 
1,722

 
0.6
 %
 
Amortization of acquired intangible assets
3,043

 
1.1
 %
 
2,985

 
1.1
 %
 
Legal contingencies
2,223

 
0.8
 %
 

 
 %
 
Non-GAAP gross profit
$
188,106

 
69.0
 %
 
$
192,748

 
68.2
 %
 
 
 
 
 
 
 
 
 
 
Research and development expense
$
48,839

 
17.9
 %
 
$
50,200

 
17.8
 %
 
Stock-based compensation expense
(7,427
)
 
(2.7
)%
 
(7,728
)
 
(2.7
)%
 
Contingent compensation expense (a)
(732
)
 
(0.3
)%
 
(1,436
)
 
(0.5
)%
 
Non-GAAP research and development expense
$
40,680

 
14.9
 %
 
$
41,036

 
14.5
 %
 
 
 
 
 
 
 
 
 
 
Selling, general and administrative expense
$
67,969

 
24.9
 %
 
$
65,661

 
23.2
 %
 
Stock-based compensation expense
(13,773
)
 
(5.0
)%
 
(12,589
)
 
(4.5
)%
 
Contingent compensation expense (a)
(2,360
)
 
(0.9
)%
 
(688
)
 
(0.2
)%
 
Amortization of acquired intangible assets
(152
)
 
(0.1
)%
 

 
 %
 
Non-GAAP selling, general and administrative expense
$
51,684

 
18.9
 %
 
$
52,384

 
18.5
 %
 
 
 
 
 
 
 
 
 
 
GAAP operating profit
$
49,612

 
18.2
 %
 
$
69,388

 
24.6
 %
 
Stock-based compensation expense
23,029

 
8.4
 %
 
22,039

 
7.8
 %
 
Unsolicited tender offer related expense
8,092

 
3.0
 %
 

 
 %
 
Amortization of acquired intangible assets
3,195

 
1.2
 %
 
2,985

 
1.1
 %
 
Contingent compensation expense (a)
3,092

 
1.1
 %
 
2,124

 
0.8
 %
 
Restructuring charges
2,622

 
1.0
 %
 

 
 %
 
Legal contingencies
2,223

 
0.8
 %
 

 
 %
 
Headquarter relocation expense (b)
2,140

 
0.8
 %
 
2,522

 
0.9
 %
 
Acquisition related expense (c)
1,737

 
0.6
 %
 
270

 
0.1
 %
 
Non-GAAP operating profit (d)
$
95,742

 
35.1
 %
 
$
99,328

 
35.2
 %
 
 
 
 
 
 
 
 
 
 
GAAP other expense, net
$
(9,339
)
 
(3.4
)%
 
$
(33,380
)
 
(11.8
)%
 
Non-cash interest expense (e)
8,642

 
3.2
 %
 
6,501

 
2.3
 %
 
Loss on extinguishment of debt

 
 %
 
27,177

 
9.6
 %
 
Non-GAAP other (expense) income, net (d)
$
(697
)
 
(0.3
)%
 
$
298

 
0.1
 %
 
 
 
 
 
 
 
 
 
 

(a) Contingent compensation expense represents contingent consideration for post-combination services associated with acquisitions.

(b) Headquarter relocation expense in Q1 2012 consists primarily of accretion interest expense on lease exit liability recorded upon vacating certain buildings of our prior headquarters, double rent expense during the transition to our new headquarter facility, and moving costs. Headquarter relocation expense recorded in Q1 2011 consisted of accelerated depreciation.

(c) Acquisition related expense represents changes in fair value of contingent consideration.






(d) Non-GAAP operating profit, and non-GAAP other income, net, exclude the effects of the pro forma adjustments as detailed above. Management has excluded the effects of these items in these measures to assist investors in analyzing and assessing our past and future core operating performance. Non-GAAP gross profit, included within the non-GAAP operating profit, is a key measure of the effectiveness and efficiency of our manufacturing processes, product mix and the average selling prices of our products and services.

(e) Non-cash interest expense is calculated in accordance with the authoritative accounting guidance for convertible debt instruments that may be settled in cash.