10-Q

UNITED STATES

SECURITIES AND EXCHANGE COMMISSION

Washington, D.C. 20549

FORM 10-Q

(Mark One)

x QUARTERLY REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

For the quarterly period ended March 31, 2013

OR

¨ TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

For the transition period from                      to                     

Commission file number: 0-25259

Bottomline Technologies (de), Inc.

(Exact name of registrant as specified in its charter)

Delaware	02-0433294
(State or other jurisdiction of incorporation or organization)	(I.R.S. Employer Identification No.)
325 Corporate Drive Portsmouth, New Hampshire	03801-6808
(Address of principal executive offices)	(Zip Code)

(603) 436-0700

(Registrant’s telephone number, including area code)

Indicate by check mark whether the registrant: (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing requirements for the past 90 days.    Yes  x    No  ¨

Indicate by check mark whether the registrant has submitted electronically and posted on its corporate website, if any, every Interactive Data File required to be submitted and posted pursuant to Rule 405 of Regulation S-T (§ 232.405 of this chapter) during the preceding 12 months (or for such shorter period that the registrant was required to submit and post such files).    Yes  x    No  ¨

Indicate by check mark whether the registrant is a large accelerated filer, an accelerated filer, a non-accelerated filer, or a smaller reporting company. See the definitions of “large accelerated filer,” “accelerated filer” and “smaller reporting company” in Rule 12b-2 of the Exchange Act (Check one):

Large Accelerated Filer	x	Accelerated Filer	¨
Non-Accelerated Filer	¨  (Do not check if a smaller reporting company)	Smaller Reporting Company	¨

Indicate by check mark whether the registrant is a shell company (as defined in Rule 12b-2 of the Exchange Act).    Yes  ¨    No  x

The number of shares outstanding of the registrant’s common stock as of April 30, 2013 was 37,824,998.

INDEX

		Page No.
PART I. FINANCIAL INFORMATION
Item 1.	Financial Statements
	Condensed Consolidated Balance Sheets as of March 31, 2013 (unaudited) and June 30, 2012		3
	Unaudited Condensed Consolidated Statements of Comprehensive Income (Loss) for the three and nine months ended March 31, 2013 and 2012		4
	Unaudited Condensed Consolidated Statements of Cash Flows for the nine months ended March  31, 2013 and 2012		5
	Notes to Unaudited Condensed Consolidated Financial Statements		6
Item 2.	Management’s Discussion and Analysis of Financial Condition and Results of Operations		17
Item 3.	Quantitative and Qualitative Disclosures about Market Risk		30
Item 4.	Controls and Procedures		31
PART II. OTHER INFORMATION
Item 1.	Legal Proceedings		31
Item 1A.	Risk Factors		31
Item 2.	Unregistered Sales of Equity Securities and Use of Proceeds		40
Item 6.	Exhibits		40
SIGNATURE			41

2

PART I. FINANCIAL INFORMATION

Item 1. Financial Statements

Bottomline Technologies (de), Inc.

Condensed Consolidated Balance Sheets

(in thousands)

	March 31, 2013			June 30, 2012
	(unaudited)
Assets
Current assets:
Cash and cash equivalents	$	283,973		$	124,801
Marketable securities		63			61
Accounts receivable, net of allowance for doubtful accounts of $829 at March 31, 2013 and $586 at June 30, 2012		46,978			45,344
Inventory, net		365			480
Deferred tax assets		7,021			6,773
Prepaid expenses and other current assets		7,301			8,212
Total current assets		345,701			185,671
Property, plant and equipment, net		22,865			19,756
Goodwill		109,055			98,974
Intangible assets, net		87,754			78,967
Other assets		15,528			9,003
Total assets	$	580,903		$	392,371
Liabilities and stockholders’ equity
Current liabilities:
Accounts payable	$	8,752		$	8,841
Accrued expenses		17,533			17,170
Deferred revenue		46,312			41,304
Total current liabilities		72,597			67,315
Convertible senior notes		136,140			—
Deferred revenue, non-current		7,572			7,072
Deferred income taxes		5,813			1,641
Other liabilities		3,246			2,157
Total liabilities		225,368			78,185
Stockholders’ equity:
Preferred Stock, $.001 par value:
Authorized shares—4,000; issued and outstanding shares—none		—			—
Common Stock, $.001 par value:
Authorized shares—100,000 at March 31, 2013 and 50,000 at June 30, 2012; issued shares—37,665 at March 31, 2013, and 36,672 at June 30, 2012; outstanding shares— 35,807 at March 31, 2013, and 34,741 at June 30, 2012		38			37
Additional paid-in capital		493,938			438,732
Accumulated other comprehensive loss		(10,244	)		(6,564	)
Treasury stock: 1,858 shares at March 31, 2013, and 1,931 shares at June 30, 2012, at cost		(21,888	)		(22,291	)
Accumulated deficit		(106,309	)		(95,728	)
Total stockholders’ equity		355,535			314,186
Total liabilities and stockholders’ equity	$	580,903		$	392,371

See accompanying notes.

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Bottomline Technologies (de), Inc.

Unaudited Condensed Consolidated Statements of Comprehensive Income (Loss)

(in thousands, except per share amounts)

	Three Months Ended March 31,						Nine Months Ended March 31,
	2013			2012			2013			2012
Revenues:
Subscriptions and transactions	$	28,749		$	20,374		$	87,657		$	57,022
Software licenses		7,048			4,158			17,216			12,593
Service and maintenance		26,809			28,876			78,999			87,392
Equipment and supplies		1,838			1,908			5,870			5,879
Total revenues		64,444			55,316			189,742			162,886
Cost of revenues:
Subscriptions and transactions		16,851			10,571			47,075			28,576
Software licenses		952			656			1,978			1,620
Service and maintenance		11,081			13,264			35,352			38,663
Equipment and supplies		1,383			1,514			4,445			4,650
Total cost of revenues		30,267			26,005			88,850			73,509
Gross profit		34,177			29,311			100,892			89,377
Operating expenses:
Sales and marketing		16,215			12,536			46,643			35,503
Product development and engineering		8,454			7,496			25,186			19,360
General and administrative		6,554			5,660			19,582			15,505
Amortization of intangible assets		5,162			3,734			14,675			11,051
Total operating expenses		36,385			29,426			106,086			81,419
(Loss) income from operations		(2,208	)		(115	)		(5,194	)		7,958
Gain (loss) on derivative instruments, net		482			—			(4,435	)		—
Other (expense) income, net		(3,134	)		119			(3,673	)		34
(Loss) income before income taxes		(4,860	)		4			(13,302	)		7,992
Income tax (benefit) provision		(1,301	)		1,336			(2,721	)		5,119
Net (loss) income	$	(3,559	)	$	(1,332	)	$	(10,581	)	$	2,873
Basic net (loss) income per share attributable to common stockholders:	$	(0.10	)	$	(0.04	)	$	(0.30	)	$	0.08
Diluted net (loss) income per share attributable to common stockholders:	$	(0.10	)	$	(0.04	)	$	(0.30	)	$	0.08
Shares used in computing basic net (loss) income per share attributable to common stockholders:		35,644			34,460			35,279			34,110
Shares used in computing diluted net (loss) income per share attributable to common stockholders:		35,644			34,460			35,279			35,179
Other comprehensive (loss) income, net of tax:
Foreign currency translation adjustments		(7,020	)		1,628			(3,680	)		(776	)
Comprehensive (loss) income	$	(10,579	)	$	296		$	(14,261	)	$	2,097

See accompanying notes.

4

Bottomline Technologies (de), Inc.

Unaudited Condensed Consolidated Statements of Cash Flows

(in thousands)

	Nine Months Ended March 31,
	2013			2012
Operating activities:
Net (loss) income	$	(10,581	)	$	2,873
Adjustments to reconcile net (loss) income to net cash provided by operating activities:
Amortization of intangible assets		14,675			11,051
Stock compensation expense		13,532			10,257
Depreciation and amortization of property, plant and equipment		5,193			4,214
Deferred income tax (benefit) expense		(6,128	)		1,414
Provision for allowances on accounts receivable		256			153
Provision for allowances for obsolescence of inventory		62			1
Shortfall (excess) tax benefits associated with stock compensation		15			(1,525	)
Amortization of debt issuance costs		358			—
Amortization of debt discount		2,884			—
Loss on derivative instruments		4,435			—
Loss on disposal of equipment		87			—
Gain on foreign exchange		(19	)		(10	)
Changes in operating assets and liabilities:
Accounts receivable		(299	)		(4,448	)
Inventory		45			(18	)
Prepaid expenses and other current assets		1,167			423
Other assets		317			(1,370	)
Accounts payable		(273	)		(863	)
Accrued expenses		(1,026	)		(1,174	)
Deferred revenue		5,074			1,916
Other liabilities		573			440
Net cash provided by operating activities		30,347			23,334
Investing activities:
Acquisition of business, net of cash acquired		(33,323	)		(27,375	)
Purchases of held-to-maturity securities		(62	)		(63	)
Proceeds from sales of held-to-maturity securities		62			63
Purchases of property and equipment		(7,657	)		(5,469	)
Proceeds from disposal of fixed assets		56			—
Net cash used in investing activities		(40,924	)		(32,844	)
Financing activities:
Proceeds from issuance of convertible senior notes		189,750			—
Debt issuance costs		(5,883	)		—
Proceeds from issuance of warrants, net of issue costs		25,776			—
Purchase of convertible note hedges		(42,390	)		—
Proceeds from exercise of warrants, net		—			8,452
Proceeds from exercise of stock options and employee stock purchase plan		5,024			6,243
(Shortfall) excess tax benefits associated with stock compensation		(15	)		1,525
Capital lease payments		(72	)		(118	)
Repurchase of common stock		(933	)		—
Net cash provided by financing activities		171,257			16,102
Effect of exchange rate changes on cash		(1,508	)		(273	)
Increase in cash and cash equivalents		159,172			6,319
Cash and cash equivalents at beginning of period		124,801			111,953
Cash and cash equivalents at end of period	$	283,973		$	118,272

See accompanying notes.

5

Bottomline Technologies (de), Inc.

Notes to Unaudited Condensed Consolidated Financial Statements

March 31, 2013

Note 1—Basis of Presentation

The accompanying unaudited condensed consolidated financial statements have been prepared in accordance with accounting principles generally accepted in the United States for interim financial information and with the instructions to Form 10-Q and Article 10 of Regulation S-X. Accordingly, they do not include all of the information and footnotes required by accounting principles generally accepted in the United States for complete financial statements. In the opinion of management, all adjustments (consisting of normal recurring accruals and adjustments) considered necessary for a fair presentation of the interim financial information have been included. Operating results for the three and nine months ended March 31, 2013 are not necessarily indicative of the results that may be expected for any other interim period or for the fiscal year ending June 30, 2013. For further information, refer to the financial statements and footnotes included in our Annual Report on Form 10-K as filed with the Securities and Exchange Commission (SEC) on August 27, 2012.

During fiscal year 2013, we changed the classification of certain employee related expenses from Cost of Revenue – Subscription and Transactions to Operating Expenses – Sales and Marketing. To ensure a consistent financial statement presentation, these changes are reflected for all periods presented.

Note 2—Recent Accounting Pronouncements

In June 2011, the Financial Accounting Standards Board (FASB) issued an accounting standards update regarding the presentation of comprehensive income in financial statements. The provisions of this standard provided an option to present the components of net income or loss and other comprehensive income or loss either as one continuous statement or as two separate but consecutive statements. We incorporated the continuous statement option of this standard effective with the period ending September 30, 2012. This changed the manner in which we present comprehensive income or loss in our overall financial statements, but did not result in any other accounting or financial reporting impact to us.

Note 3—Fair Value

Fair Value of Assets and Liabilities

We measure fair value at the price that would be received to sell an asset or paid to transfer a liability in an orderly transaction between market participants at the measurement date. In determining fair value, the assumptions that market participants would use in pricing an asset or liability (the inputs) are based on a tiered fair value hierarchy consisting of three levels, as follows:

Level 1: Observable inputs such as quoted prices for identical assets or liabilities in active markets.

Level 2: Other inputs that are observable directly or indirectly, such as quoted prices for similar instruments in active markets or for similar markets that are not active.

Level 3: Unobservable inputs for which there is little or no market data and which require us to develop our own assumptions about how market participants would price the asset or liability.

Valuation techniques for assets and liabilities include methodologies such as the market approach, the income approach or the cost approach, and may use unobservable inputs such as projections, estimates and management’s interpretation of current market data. These unobservable inputs are only utilized to the extent that observable inputs are not available or cost-effective to obtain.

At March 31, 2013 and June 30, 2012, our assets and liabilities measured at fair value on a recurring basis were as follows:

	March 31, 2013								June 30, 2012
	Fair Value Measurements Using Input Types								Fair Value Measurements Using Input Types
(in thousands)	Level 1		Level 2		Level 3		Total		Level 1		Level 2		Level 3		Total
Money market funds (cash and cash equivalents)	$	26,465	$	—	$	—	$	26,465	$	65,743	$	—	$	—	$	65,743

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Fair Value of Financial Instruments

We have certain financial instruments which consist of cash and cash equivalents, marketable securities, accounts receivable, accounts payable and convertible notes (the Notes, as defined in Note 10 below). Fair value information for each of these instruments is as follows:

• Cash and cash equivalents, accounts receivable and accounts payable fair value approximates their carrying values, due to the short-term nature of these instruments.

• Marketable securities are classified as held to maturity and recorded at amortized cost which, at March 31, 2013 and June 30, 2012, approximated fair value. These investments all mature within one year.

• The Notes were recorded at $133.3 million upon issuance, which reflected the principal amount of the Notes less the fair value of the embedded conversion option (Conversion Feature). The carrying value of the Notes will be accreted, over the remaining term to maturity, to their principal value of $189.8 million. The fair value of the Notes (inclusive of the Conversion Feature) was approximately $221.5 million as of March 31, 2013. We estimated the fair value of the Notes by reference to quoted market prices; however the Notes have only a limited trading volume and as such this fair value estimate is not necessarily the value at which the Notes could be retired or transferred.

Note 4—Product and Business Acquisitions

2013 Acquisition Activity

Prilos AG

On February 13, 2013, we acquired Prilos AG (Prilos), located in Frankfurt, Germany for cash of €0.5 million (approximately $0.7 million based on exchange rates in effect at the acquisition date). Prilos is a long-time reseller of our document automation products in the German marketplace.

At March 31, 2013, we were still finalizing our estimates of fair value for certain intangible assets acquired. Accordingly, the values disclosed for intangible assets and goodwill are subject to change as we finalize our fair value analysis, which we expect to complete during the quarter ending June 30, 2013. In the preliminary allocation of the purchase price we recognized $0.2 million of goodwill, of which $0.1 million is deductible for income tax purposes in the US over a period of fifteen years. The goodwill is not deductible for income tax purposes in Germany.

Prilos’ operating results have been included in our operating results from the date of the acquisition forward as a component of the Payments and Transactional Documents segment and all of the goodwill was allocated to this segment. Identifiable intangible assets of $0.4 million represent customer related assets that are being amortized over a weighted average useful life of seven years.

5280 Dynamic Solutions LLC

On October 25, 2012, we acquired certain assets and assumed certain liabilities of 5280 Dynamic Solutions LLC (5280), a US based software company, in exchange for a cash payment of $1.6 million. The acquisition provides us with new technology with which we intend to expand our product offerings to include SharePoint-based document management solutions for accounts payable automation and other document-centric business needs.

In the allocation of the purchase price we recognized $0.8 million of goodwill which is deductible for US income tax purposes over a period of fifteen years.

5280’s operating results have been included in our operating results from the date of the acquisition forward as a component of the Payments and Transactional Documents segment and all of the goodwill was allocated to this segment. Identifiable intangible assets of $0.7 million include customer related assets and core technology that are being amortized over a weighted average useful life of ten years.

Albany Software Ltd.

On September 11, 2012, we completed the acquisition of Albany Software Ltd. (Albany), a UK based corporation. We acquired, through a UK subsidiary, all of the Albany outstanding share capital from Albany’s stockholders in exchange for a cash payment of £20 million (approximately $32 million based on exchange rates in effect at the acquisition date). Albany is one of the UK’s leading BACS solution providers and their solutions are used by more than 5,000 businesses to streamline, automate and manage processes involving the collection of direct debits and electronic payments.

7

In the allocation of the purchase price set forth below we recognized $10.7 million of goodwill. The goodwill arose due to the recognition of certain deferred tax liabilities in purchase accounting and the assembled workforce of Albany. The goodwill is not deductible for income tax purposes.

Albany’s operating results have been included in our operating results from the date of the acquisition forward as a component of the Payments and Transactional Documents segment and all of the Albany goodwill was allocated to this segment. Identifiable intangible assets aggregating $23.9 million are being amortized over a weighted average useful life of thirteen years. The identifiable intangible assets include customer related assets, core technology and other intangible assets (a tradename) and are being amortized over weighted average lives of fourteen years, five years and two years, respectively.

The allocation of the purchase price as of March 31, 2013 is as follows:

	(in thousands)
Current assets	$	6,442
Property and equipment		334
Customer related intangible assets		21,786
Core technology		1,920
Other intangible assets		145
Goodwill		10,725
Current liabilities		(3,726	)
Other liabilities		(5,489	)
Total purchase price	$	32,137

For the three and nine months ended March 31, 2013, revenues attributable to the above acquisitions, in the aggregate, represented less than 3% of our consolidated year to date revenues and were integrated into our existing business lines in a manner that makes tracking or reporting earnings specifically attributable to these acquisition impracticable. As the above acquisitions were not material to our financial results, pro forma results of operations have not been presented. Acquisition expenses of approximately $1.0 million were expensed during the nine months ended March 31, 2013, principally as a component of general and administrative expenses in connection with fiscal year 2013 acquisitions.

The valuation of acquired intangible assets for our acquisitions was estimated by performing projections of discounted cash flow, whereby revenues and costs associated with each intangible asset are forecast to derive expected cash flow which is discounted to present value at discount rates commensurate with perceived risk. The valuation and projection process is inherently subjective and relies on significant unobservable inputs (Level 3 inputs). The valuation assumptions also take into consideration our estimates of contract renewal, technology attrition and revenue projections.

Other Investments

In March 2013, we made an investment of $3.0 million in a privately held technology company. This investment is accounted for at cost as we do not have the ability to exercise significant influence over the investee. We will evaluate this investment periodically for indicators of impairment and impairment losses, to the extent occurring, will be recorded as an operating expense.

8

Note 5—Net Income Per Share

The following table sets forth the computation of basic and diluted net income per share:

	Three Months Ended March 31,						Nine Months Ended March 31,
	2013			2012			2013			2012
	(in thousands)
Numerator:
Net (loss) income allocable to common stockholders	$	(3,559	)	$	(1,332	)	$	(10,581	)	$	2,873
Denominator:
Shares used in computing basic net (loss) income per share attributable to common stockholders		35,644			34,460			35,279			34,110
Effect of dilutive securities		—			—			—			1,069
Shares used in computing diluted net (loss) income per share attributable to common stockholders		35,644			34,460			35,279			35,179
Basic net (loss) income per share attributable to common stockholders	$	(0.10	)	$	(0.04	)	$	(0.30	)	$	0.08
Diluted net (loss) income per share attributable to common stockholders	$	(0.10	)	$	(0.04	)	$	(0.30	)	$	0.08

The calculation of basic net (loss) income per share is computed using the weighted average number of common shares outstanding during the period and excludes any dilutive effects of stock options, unvested restricted stock, stock warrants and the impact of shares that could be issued upon conversion or maturity of our convertible notes.

For the three and nine months ended March 31, 2013, 2.8 million and 3.0 million stock options and shares of restricted stock were excluded from the calculation of diluted earnings per share, respectively, as their effect would have been anti-dilutive.

For the three and nine months ended March 31, 2012, 3.1 million and zero stock options and shares of restricted stock were excluded from the calculation of diluted earnings per share, respectively, as their effect would have been anti-dilutive.

As more fully discussed in Note 10, in December 2012 we issued convertible notes maturing in December 2017. We intend, upon conversion or maturity of the Notes, to satisfy any conversion premium by issuing shares of our common stock. We have also issued warrants for up to 6.3 million shares of our common stock at an exercise price of $40.04 per share. For the three and nine months ended March 31, 2013, shares potentially issuable upon conversion or maturity of the Notes or upon exercise of the warrants were excluded from our earnings per share calculations as their effect would have been anti-dilutive.

Note 6—Operations by Segments and Geographic Areas

Segment Information

Operating segments are the components of our business for which separate financial information is available that is evaluated regularly by the chief operating decision maker in deciding how to allocate resources and in assessing performance. Our chief operating decision maker is our chief executive officer. Our operating segments are organized principally by the type of product or service offered and by geography.

Similar operating segments have been aggregated into three reportable segments as follows:

Payments and Transactional Documents. Our Payments and Transactional Documents segment is a supplier of software products that provide a range of financial business process management solutions including making and collecting payments, sending and receiving invoices, and generating and storing business documents. This segment also incorporates our payments automation software for direct debit and receivables management and provides a range of standard professional services and equipment and supplies that complement and enhance our core software products. Revenue associated with the aforementioned products and services is typically recorded upon delivery. This segment also incorporates our check printing solutions in Europe as well as certain other solutions that are licensed on a subscription basis, revenue for which is typically recorded on a subscription or transaction basis or ratably over the expected life of the customer relationship.

9

Banking Solutions. The Banking Solutions segment provides solutions that are specifically designed for banking and financial institution customers. Our customized transaction banking solutions typically involve longer implementation periods and a significant level of professional services. Due to the customized nature of these products, revenue is generally recognized over the period of project performance on a percentage of completion basis. Periodically, we license these solutions on a subscription basis which has the effect of contributing to recurring revenue and the revenue predictability of future periods, but which also delays revenue recognition over a period that is longer than the period of project performance. This segment also includes our commercial banking business, which we acquired in March 2012. Our commercial banking products are Software as a Service (SaaS) offerings focused predominantly on medium-sized and small banks and financial institutions, and revenue for these products is typically recognized on a subscription or transaction basis or ratably over the estimated life of the customer relationship.

Outsourced Solutions. The Outsourced Solutions segment provides customers with outsourced and hosted SaaS offerings that facilitate electronic payment, electronic invoicing, and spend management. Our legal spend management solutions, which enable customers to create more efficient processes for managing invoices generated by outside law firms while offering insight into important legal spend factors such as expense monitoring and outside counsel performance, are included within this segment. This segment also incorporates our hosted and outsourced payments and accounts payable automation solutions, including Paymode-X and SWIFT Access Service. Revenue within this segment is generally recognized on a subscription or transaction basis or ratably over the estimated life of the customer relationship.

Periodically a sales person in one operating segment will sell products and services that are typically sold within a different operating segment. In such cases, the transaction is generally recorded by the operating segment to which the sales person is assigned. Accordingly, segment results can include the results of transactions that have been allocated to a specific segment based on the contributing sales resources, rather than the nature of the product or service. Conversely, a transaction can be recorded by the operating segment primarily responsible for delivery to the customer, even if the sales person is assigned to a different operating segment.

Our chief operating decision maker assesses segment performance based on a variety of factors that can include segment revenue and a segment measure of profit or loss. Each segment’s measure of profit or loss is on a pre-tax basis and excludes stock compensation expense, acquisition-related expenses (including acquisition related contingent consideration), amortization of intangible assets, impairment losses on equity investments, restructuring related charges and certain non-cash items related to our convertible notes. There are no inter-segment sales; accordingly, the measure of segment revenue and profit or loss reflects only revenues from external customers. The costs of certain corporate level expenses, primarily general and administrative expenses, are allocated to our operating segments at predetermined rates that are established as a percentage of the segment’s budgeted revenues.

We do not track or assign our assets by operating segment.

Segment information for the three and nine months ended March 31, 2013 and 2012 according to the segment descriptions above is as follows:

	Three Months Ended March 31,				Nine Months Ended March 31,
	2013		2012		2013		2012
	(in thousands)
Segment revenue:
Payments and Transactional Documents	$	29,642	$	25,254	$	84,050	$	75,063
Banking Solutions		17,051		14,051		52,025		40,438
Outsourced Solutions		17,751		16,011		53,667		47,385
Total segment revenue	$	64,444	$	55,316	$	189,742	$	162,886
Segment measure of profit:
Payments and Transactional Documents	$	7,906	$	5,415	$	21,274	$	17,574
Banking Solutions		1,336		1,485		4,170		6,371
Outsourced Solutions		1,530		1,653		6,206		6,888
Total measure of segment profit	$	10,772	$	8,553	$	31,650	$	30,833

10

A reconciliation of the measure of segment profit to GAAP operating (loss) income before income taxes is as follows:

	Three Months Ended March 31,						Nine Months Ended March 31,
	2013			2012			2013			2012
	(in thousands)
Segment measure of profit	$	10,772		$	8,553		$	31,650		$	30,833
Less:
Amortization of intangible assets		(5,162	)		(3,734	)		(14,675	)		(11,051	)
Stock compensation expense		(4,591	)		(3,719	)		(13,532	)		(10,257	)
Acquisition related expenses		(3,165	)		(706	)		(7,445	)		(1,007	)
Restructuring expenses		(62	)		(509	)		(1,192	)		(560	)
Add:
Gain (loss) on derivative instruments, net		482			—			(4,435	)		—
Other (expense) income, net		(3,134	)		119			(3,673	)		34
(Loss) income before income taxes	$	(4,860	)	$	4		$	(13,302	)	$	7,992

The following depreciation expense amounts are included in the segment measure of profit:

	Three Months Ended March 31,				Nine Months Ended March 31,
	2013		2012		2013		2012
	(in thousands)
Depreciation expense:
Payments and Transactional Documents	$	493	$	408	$	1,493	$	1,199
Banking Solutions		571		278		1,611		758
Outsourced Solutions		688		743		2,089		2,257
Total depreciation expense	$	1,752	$	1,429	$	5,193	$	4,214

Geographic Information

We have presented geographic information about our revenues below. This presentation allocates revenue based on the point of sale, not the location of the customer. Accordingly, we derive revenues from geographic locations based on the location of the customer that would vary from the geographic areas listed here; particularly in respect of financial institution customers located in Australia and Canada for which the point of sale was the United States.

	Three Months Ended March 31,				Nine Months Ended March 31,
	2013		2012		2013		2012
	(in thousands)
Revenues from unaffiliated customers:
United States	$	41,390	$	37,310	$	126,157	$	110,202
United Kingdom		21,164		16,284		57,991		47,507
Continental Europe		1,079		910		3,241		2,903
Asia-Pacific		811		812		2,353		2,274
Total revenues from unaffiliated customers	$	64,444	$	55,316	$	189,742	$	162,886

Long-lived assets, excluding deferred tax assets and intangible assets, which are based on geographical location, were as follows:

	March 31,		June 30,
	2013		2012
	(in thousands)
Long-lived assets
United States	$	30,623	$	19,189
United Kingdom		4,202		4,332
Continental Europe		28		5
Asia-Pacific		93		128
Total long-lived assets	$	34,946	$	23,654

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Note 7—Income Taxes

The income tax expense we record in any interim period is based on our estimated effective tax rate for the fiscal year. The calculation of our estimated effective tax rate requires an estimate of pretax income by tax jurisdiction, as well as total tax expense for the fiscal year. Accordingly, this tax rate is subject to adjustment if, in subsequent interim periods, there are changes to our initial estimates of total tax expense or pretax income, including income by jurisdiction.

We recorded an income tax benefit of $1.3 million and income tax expense of $1.3 million for the three months ended March 31, 2013 and 2012, respectively. The tax benefit arose principally from our US operations and was offset in part by tax expense associated with our UK and Australian operations. The tax benefit also included a tax benefit of $0.3 million resulting from the enactment on January 2, 2013 of the American Taxpayer Relief Act of 2012, which retroactively extended the US research and development credit for two years beginning January 1, 2012. The income tax expense recorded for the quarter ended March 31, 2012 was attributable to our UK, Australian, and US operations.

We recorded an income tax benefit of $2.7 million and income tax expense of $5.1 million for the nine months ended March 31, 2013 and 2012, respectively. The tax benefit arose principally from our US operations, offset in part by tax expense associated with our UK and Australian operations. The tax benefit also included a tax benefit of $0.3 million resulting from the enactment on January 2, 2013 of the American Taxpayer Relief Act of 2012, which retroactively extended the US research and development credit for two years beginning January 1, 2012. The income tax expense for the nine months ended March 31, 2012 was primarily attributable to our UK, Australian and US operations.

Excluding the impact of discrete events, the excess of our effective tax rate over statutory rates is due to our inability to utilize UK foreign tax credits in the determination of US taxable income. This has the effect of taxing certain income twice, once in the UK and again in the US, which results in a higher overall effective tax rate (or a decrease in our overall US tax benefit).

We currently anticipate that our unrecognized tax benefits will decrease within the next twelve months by approximately $0.1 million as a result of the expiration of certain statutes of limitations associated with intercompany transactions subject to tax in multiple jurisdictions.

We record a deferred tax asset if we believe it is more likely than not that we will recover that asset against future taxable income. In making this determination we consider historical and projected financial results, the planned reversal of existing deferred tax liabilities that provide a source of future taxable income and the availability of tax planning strategies. The Notes we issued in December 2012 will result in a significant future expense burden for interest expense, in particular non-cash interest expense, as the debt is accreted to the principal amount due on maturity. While we expect to deploy the debt proceeds in a manner that offsets the impact of this expense, if we are unable to do so, all or a portion of our US based deferred tax assets might become impaired which would give rise to the recognition of significant deferred tax expense in the period in which that determination was made.

Note 8—Goodwill and Other Intangible Assets

The following tables set forth the information for intangible assets subject to amortization and for intangible assets not subject to amortization. Other intangible assets consist of acquired tradenames, backlog, patents and below market lease arrangements.

	As of March 31, 2013
	Gross Carrying Amount		Accumulated Amortization			Net Carrying Value		Weighted Average Remaining Life
	(in thousands)							(in years)
Amortized intangible assets:
Customer related	$	131,386	$	(67,016	)	$	64,370		11.2
Core technology		50,632		(34,523	)		16,109		6.9
Other intangible assets		11,934		(4,659	)		7,275		5.4
Total	$	193,952	$	(106,198	)	$	87,754
Unamortized intangible assets:
Goodwill							109,055
Total intangible assets						$	196,809

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	As of June 30, 2012
	Gross Carrying Amount		Accumulated Amortization			Net Carrying Value		Weighted Average Remaining Life
	(in thousands)							(in years)
Amortized intangible assets:
Customer related	$	111,159	$	(58,653	)	$	52,506		10.7
Core technology		48,534		(31,179	)		17,355		7.5
Other intangible assets		11,801		(2,695	)		9,106		5.9
Total	$	171,494	$	(92,527	)	$	78,967
Unamortized intangible assets:
Goodwill							98,974
Total intangible assets						$	177,941

Estimated amortization expense for fiscal year 2013 and subsequent fiscal years is as follows:

	(in thousands)
2013	$	19,480
2014		15,711
2015		13,618
2016		11,564
2017		9,234
2018 and thereafter		32,822

The following table represents a rollforward of our goodwill balances, by reportable segment, as follows:

	Payments and Transactional Documents			Banking Solutions		Outsourced Solutions
	(in thousands)
Balance at June 30, 2012	$	54,329		$	8,420	$	36,225
Goodwill acquired during the period		11,784			—		—
Purchase accounting adjustments		—			33		—
Impact of foreign currency translation		(1,462	)		—		(274	)
Balance at March 31, 2013	$	64,651		$	8,453	$	35,951

Note 9—Restructuring Costs

During the nine months ended March 31, 2013, in response to recent acquisitions and business events, we realigned our workforce and recorded pre-tax restructuring expenses associated with severance related benefits to employees and facility exit costs.

A rollforward of the restructuring activity for the nine months ended March 31, 2013 is as follows:

	Severance Costs (in thousands)			Facility Exit Costs (in thousands)
Accrued at June 30, 2012	$	228		$	—
Charged to expense		1,035			157
Payments charged against the accrual		(1,231	)		(157	)
Accrued at March 31, 2013	$	32		$	—

In addition to the costs associated with severance related benefits and facility exit costs noted above, we also recorded $0.3 million of expense related to stock based compensation during the nine months ended March 31, 2013.

Note 10—Convertible Senior Notes

On December 12, 2012, we issued $189.8 million aggregate principal amount of our 1.50% Convertible Senior Notes maturing on December 1, 2017 (the Notes), inclusive of the underwriters’ exercise in full of their over-allotment option of $24.8 million. Cash interest at a rate of 1.50% per year began to accrue on December 12, 2012 and is payable semi-annually on June 1 and December 1 of each year beginning on June 1, 2013. We received net proceeds from the offering of approximately $167.3 million after adjusting for debt issue costs, including the underwriting discount, as well as the net cash used to purchase the Note Hedges and sell the Warrants, as discussed below.

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The Notes were issued under an indenture dated December 12, 2012 (the “Base Indenture”) by and between us and The Bank of New York Mellon Trust Company, N.A., as Trustee and a First Supplemental Indenture dated December 12, 2012 (the “First Supplemental Indenture”) by and between us and the Trustee (the Base Indenture and the First Supplemental Indenture are collectively referred to as the “Indenture”). There are no financial or operating covenants relating to the Notes.

The Notes are senior unsecured obligations of ours and rank senior in right of payment to any future unsecured indebtedness that is expressly subordinated in right of payment to the Notes, and equal in right of payment to any of our existing and future unsecured indebtedness that is not subordinated. The Notes are effectively junior in right of payment to any of our secured indebtedness (to the extent of the value of assets securing such indebtedness) and structurally junior to all existing and future indebtedness and other liabilities, including trade payables, of our subsidiaries. Prior to this offering, neither we nor our subsidiaries had any outstanding indebtedness for borrowed money. The Indenture does not limit the amount of debt that we or our subsidiaries may incur. The Notes are not guaranteed by us or any of our subsidiaries.

Holders may convert their Notes at their option, prior to the close of business on the business day immediately preceding June 1, 2017, in multiples of $1,000 principal amount, only under the following circumstances:

• during any calendar quarter commencing after the calendar quarter ending on March 31, 2013 (and only during such calendar quarter), if the last reported sale price of our common stock for at least 20 trading days (whether or not consecutive) during a period of 30 consecutive trading days ending on the last trading day of the immediately preceding calendar quarter is greater than or equal to 130% of the conversion price on each applicable trading day;

• during the five business day period after any five consecutive trading day period (the “measurement period”) in which the trading price per $1,000 principal amount of the convertible notes for each trading day of the measurement period was less than 98% of the product of the last reported sales price of our common stock and the conversion rate on each trading day; or

• upon the occurrence of specified corporate events, including a merger or a sale of all or substantially all of our assets.

On or after June 1, 2017 until the close of business on the second scheduled trading day immediately preceding the maturity date of December 1, 2017, holders may convert their Notes, in multiples of $1,000 principal amount, at the option of the holder regardless of the foregoing circumstances.

The conversion rate for the Notes is initially 33.3042 shares per $1,000 principal amount of Notes (equivalent to an initial conversion price of approximately $30.03 per share of our common stock). The conversion rate is subject to customary adjustment for certain events as described in the Indenture. At the time we issued the Notes and prior to January 17, 2013, we did not have a sufficient number of available authorized shares of our common stock to enable us to settle, with shares of our common stock, the maximum obligations we may have under the Conversion Feature of the Notes. Therefore the Notes required, prior to us receiving an approval from our shareholders to increase the authorized shares of our common stock to an amount that would allow us to settle the maximum potential obligations under the Conversion Feature in shares, that we settle any such obligation in cash. Accordingly, the Conversion Feature was initially recorded as a derivative liability, measured at fair value, in our balance sheet.

The principal balance of the Notes is always required to be settled in cash. However, the Notes provide that once we receive approval to increase our authorized shares of common stock to an amount that would permit us to settle the entire maximum conversion obligation in shares, we are permitted at our election to settle any conversion obligation in excess of the principal portion in cash, shares of our common stock, or a combination of cash and shares of our common stock.

On January 17, 2013, our shareholders approved a proposal to amend our Amended and Restated Certificate of Incorporation to increase our authorized shares from 50,000,000 to 100,000,000 shares which is a sufficient number of shares to enable us to settle the entire maximum potential obligation under the Conversion Feature in shares, should we so elect. Accordingly, as of January 17, 2013 the Conversion Feature met the stockholders equity classification requirements and was re-measured at fair value as of that date, with the change in fair value reflected in earnings, and was reclassified from a liability to stockholders equity, net of taxes.

We may not redeem the Notes prior to their maturity date. If we undergo a fundamental change, (as described in the Indenture), subject to certain conditions, holders may require us to repurchase for cash all or part of their Notes in principal amounts of $1,000 or an integral multiple thereof. The fundamental change repurchase price will be equal to 100% of the principal amount of the Notes to be repurchased, plus accrued and unpaid interest to, but excluding, the fundamental change repurchase date.

The Indenture contains customary events of default with respect to the Notes and provides that upon certain events of default occurring and continuing the Trustee may, and the Trustee at the request of such holders of at least 25% in principal amount of the convertible notes shall, declare 100% of the principal of and accrued and unpaid interest, if any, on the Notes to be due and payable. In case of certain events of bankruptcy, insolvency or reorganization, involving us or a significant subsidiary, 100% of the principal of and accrued and unpaid interest on the Notes will automatically become due and payable. Upon such a declaration of acceleration, such principal and accrued and unpaid interest, if any, will be due and payable immediately.

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Under limited circumstances, we may be required to pay contingent interest on the Notes as a result of failure to comply with the reporting obligations in the Indenture or failure to file required Securities and Exchange Commission documents and reports. When applicable, the contingent interest payable per $1,000 principal amount is 0.25% per annum over the applicable term as provided under the Indenture. The contingent interest features of the Notes are embedded derivative instruments. The estimated fair value of the contingent interest features of the Notes was zero at issuance and at March 31, 2013, as the likelihood of any liability being incurred under these provisions was deemed remote and, to the extent occurring, the time period during which a contingent interest charge would apply is projected to be short.

The Notes were recorded upon issuance using a residual method of valuation, meaning since the Conversion Feature was initially a derivative instrument recorded at fair value, we allocated debt proceeds to the Conversion Feature based on the fair value of that instrument and the residual proceeds were allocated to the Notes. The carrying amount of the Notes will be accreted to the principal amount over the remaining term to maturity and we will record a corresponding charge to interest expense.

The net carrying amount of the convertible notes at March 31, 2013 was as follows:

	(in thousands)
Principal amount	$	189,750
Unamortized discount		(53,610	)
Net carrying value	$	136,140

We incurred certain third party costs in connection with our issuance of the Notes, principally related to underwriting and legal fees, which will be amortized to interest expense ratably over the five-year term of the Notes.

The following table sets forth total interest expense related to the convertible notes:

	Three Months Ended March 31,						Nine Months Ended March 31,
	2013			2012			2013			2012
	(in thousands)
Contractual interest expense (cash)	$	712			—		$	862			—
Amortization of debt issue costs (non-cash)		297			—			358			—
Amortization of debt discount (non-cash)		2,399			—			2,884			—
	$	3,408			—		$	4,104			—
Effective interest rate of the liability component		7.18	%		—	%		7.17	%		—	%

Note Hedges

In December 2012, we entered into privately negotiated transactions to purchase hedge instruments (the Note Hedges), covering approximately 6.3 million shares of our common stock. The Note Hedges are subject to anti-dilution provisions substantially similar to those of the Notes, have a strike price that corresponds to the conversion price of the Notes, are exercisable by us upon any conversion under the Notes and expire on December 1, 2017.

The Note Hedges are generally expected to reduce the potential dilution to our common stock (or, in the event the Conversion Feature is settled in cash, to reduce our cash payment obligation) in the event that at the time of conversion our stock price exceeds the conversion price under the Notes. The cost of the Note Hedges, $42.3 million, is expected to be tax deductible as an original issue discount over the life of the Notes, as the Notes and the Note Hedges represent an integrated debt instrument for tax purposes.

The Note Hedges did not initially satisfy the accounting requirements necessary for classification within stockholders equity, as upon issuance and prior to January 17, 2013 any transaction under the Note Hedges was required to be settled in cash. Accordingly, the Note Hedges were initially recorded as a derivative asset, measured at fair value, in our balance sheet.

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As of January 17, 2013, the Note Hedges met the stockholders equity classification requirements as we had an adequate level of authorized shares to permit us to settle the Note Hedges in shares of our common stock. Accordingly, on January 17, 2013 we re-measured the Note Hedges at fair value, with the change in fair value reflected in earnings, and this amount was reclassified from an asset to stockholders equity, net of tax.

The Note Hedges are transactions that are separate from the terms of the Notes and the Warrants (discussed below) and holders of the Notes and the Warrants have no rights with respect to the Note Hedges.

Warrants

In December 2012, we received aggregate proceeds of $25.8 million, net of issue costs, from the sale of warrants (the Warrants), for the purchase of up to 6.3 million shares of our common stock, subject to antidilution adjustments, at a strike price of $40.04 per share. The Warrants are exercisable in equal tranches over a period of 150 days beginning on March 1, 2018 and ending on October 18, 2018.

The Warrants are also derivative instruments. A portion of the Warrants met the stockholders equity classification requirements upon issuance and, as such, were recorded in equity as of that date. Certain of the Warrants, however, did not satisfy the requirements necessary for classification within stockholders equity as, for the period of December 6, 2012 through December 12, 2012 we would have been required, under specific circumstances, to settle obligations with the counterparty to those Warrants in cash. Accordingly, for this period, the Warrants for which cash settlement might have been required were recorded as a derivative liability. The requirement to potentially cash settle a portion of the Warrants expired on December 12, 2012, and we did not incur any actual cash payment obligation thereunder prior to that date. On December 12, 2012 we re-measured the fair value of those Warrants that were initially recorded as a derivative liability and recorded a $2.8 million loss related to a change in fair value. Since as of December 12, 2012 we met the stockholders equity classification requirements, the fair value of the Warrants were reclassified to stockholders equity as of that date.

The Warrants are transactions that are separate from the terms of the Notes and the Note Hedges, and holders of the Notes and Note Hedges have no rights with respect to the Warrants.

Note 11—Derivative Instruments

Our derivative instruments for the three and nine month periods ending March 31, 2013 consisted of the Note Hedges, Conversion Feature and Warrants as discussed in Note 10. As of March 31, 2013 each of these instruments met the classification requirements for inclusion within stockholders equity and as such they are not subject to on-going fair value re-measurement. We are required, for the remaining term of the Notes, to assess whether we continue to meet the stockholders equity classification requirements. If in any future period we fail to satisfy those requirements we would need to reclassify the derivative instruments out of stockholders equity, to either assets or liabilities depending on their nature, and record those instruments at fair value with changes in fair value reflected in earnings.

Changes in the fair value of our derivative instruments, prior to and as of the date of reclassification to stockholders equity, were recognized in earnings as a component of “Gain (loss) on derivative instruments, net”. The following table summarizes our net loss on changes in fair value (in thousands) and provides a rollforward of activity from inception through March 31, 2013. The Conversion Feature and Note Hedges are not actively traded and were valued using an option pricing model that uses observable and unobservable market data for inputs including the trading price and implied volatility of our common stock, risk-free interest rate and other factors.

The gain (loss) as a result of changes in the fair value of our derivative instruments for the three and nine months ended March 31, 2013 is as follows:

	Fair Value at December 31, 2012		Fair Value upon reclassification to equity			Fair Value at March 31, 2013		Gain/(loss) on derivative instruments for the three months ending March 31, 2013
Note Hedges	$	47,817	$	50,086	1	$	n/a	$	2,269
Conversion Feature		64,009		65,796	1		n/a		(1,787	)
Net gain on derivative instruments								$	482

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	Fair Value at Inception		Fair Value upon reclassification to equity			Fair Value at March 31, 2013		Gain/(loss) on derivative instruments for the nine months ending March 31, 2013
Note Hedges	$	42,390	$	50,086	1	$	n/a	$	7,696
Conversion Feature		56,495		65,796	1		n/a		(9,301	)
Warrants		12,950		15,780	2		n/a		(2,830	)
Net loss on derivative instruments								$	(4,435	)

¹  The requirements for stockholders equity classification for the Note Hedges and Conversion Feature were met as of January 17, 2013 and, as of that date, we re-measured the fair value of these instruments and reclassified those amounts to stockholders equity. The fair values and resulting gain or loss are based on re-measurement at January 17, 2013.

² The conditions that gave rise to the potential cash settlement of a portion of the Warrants expired on December 12, 2012 and, as of that date, we re-measured the fair value of these instruments and reclassified that amount to stockholders equity. The fair value and resulting loss is based on re-measurement at December 12, 2012.

Note 12—Contingencies

On June 29, 2012, ACI Worldwide, Inc. (ACI) filed a lawsuit in the Superior Court of Fulton County, Georgia against us and one of our employees alleging, among other things, tortious interference with contract and business relations, unjust enrichment and violation of the Georgia Trade Secrets Act of 1990, in connection with our hiring of several former ACI employees. The complaint sought injunctive relief, costs and unspecified monetary damages. This lawsuit was subsequently removed to the U.S. District Court for the Northern District of Georgia, Atlanta Division. The lawsuit was settled by the parties on January 21, 2013 and the case was dismissed with prejudice on February 4, 2013. The lawsuit and the settlement did not have a material adverse effect on our financial statements.

On February 12, 2013 R&N Check Corp (R&N) filed a lawsuit against us in the Superior Court of Rockingham County, New Hampshire. The lawsuit alleges breach of contract in connection with a patent purchase and settlement agreement that we entered into in January 2006 and seeks unspecified damages and recovery of legal costs. On March 18, 2013 we removed the lawsuit to the United States District Court for the District of New Hampshire and R&N thereafter filed a motion to remand to the New Hampshire state court. We intend to vigorously defend ourselves in this matter and do not currently believe that the outcome of this action will have a material adverse consequence on our financial statements.

We are, from time to time, a party to other legal proceedings and claims that arise out of the ordinary course of our business. We do not currently believe that there are claims or proceedings pending against us for which the ultimate resolution would have a material effect on, or require disclosure in our financial statements.

Item 2. Management’s Discussion and Analysis of Financial Condition and Results of Operations

This Quarterly Report on Form 10-Q contains forward-looking statements that involve risks and uncertainties. The statements contained in this report that are not purely historical are forward-looking statements within the meaning of Section 27A of the Securities Act of 1933, as amended, and Section 21E of the Securities Exchange Act of 1934, as amended (the Exchange Act). Without limiting the foregoing, the words may, will, should, could, expects, plans, intends, anticipates, believes, estimates, predicts, potential and similar expressions are intended to identify forward-looking statements. All forward-looking statements included in this Quarterly Report on Form 10-Q are based on information available to us up to and including the date of this report, and we assume no obligation to update any such forward-looking statements. Our actual results could differ materially from those anticipated in these forward-looking statements as a result of certain factors, including those set forth below under “Management’s Discussion and Analysis of Financial Condition and Results of Operations” and “Item 1A. Risk Factors” and elsewhere in this Form 10-Q. You should carefully review those factors and also carefully review the risks outlined in other documents that we file from time to time with the Securities and Exchange Commission.

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In the management discussion that follows we have highlighted those changes and operating factors that were the primary factors affecting period to period fluctuations. The remainder of the change in period to period fluctuations from that which is specifically disclosed is arising from various individually insignificant items.

Overview

We provide cloud-based payment, invoice and banking solutions to corporations, insurance companies, financial institutions and banks around the world. Our solutions are used to streamline, automate and manage processes and transactions involving global payments, invoice receipt and approval, collections, cash management, risk mitigation, document management, reporting and document archive. We offer hosted or Software as a Service (SaaS) solutions, as well as software designed to run on-site at the customer’s location. A growing portion of our offerings are being sold as SaaS-based solutions and paid for on a subscription and transaction basis. Historically, however, our software has been sold predominantly on a perpetual license basis.

Our corporate customers rely on our solutions to automate their payment and accounts payable processes and to streamline and manage the production and retention of electronic documents. We offer legal spend management solutions that automate receipt and review of legal invoices for insurance companies and other large corporate consumers of outside legal services. We operate a cloud-based network that facilitates the exchange of electronic payments and invoices between buyers and their suppliers. We also offer solutions that banks use to provide cash management and treasury capabilities to their business customers. Our document automation solutions are used by organizations to automate paper-intensive processes for the generation of transactional and supply chain documents.

Our solutions complement, leverage and extend our customers’ existing information systems, accounting applications and banking relationships and can be deployed quickly and efficiently. To help our customers receive the maximum value from our products and meet their specific business requirements, we also provide professional services for installation, training, consulting and product enhancement.

Convertible Note Offering

In December 2012, we raised approximately $167 million in net proceeds upon completion of an underwritten public offering of convertible senior notes (the Notes). The Notes pay semi-annual interest at a rate of 1.50% per annum on the $189.8 million aggregate principal balance and mature in December 2017. We are required to settle the principal balance of the Notes in cash upon conversion or maturity, however as of January 17, 2013 we are permitted to settle any conversion obligation in excess of the principal balance in either cash, shares of our common stock or a combination of cash and shares of our common stock, at our election.

We entered into hedging transactions designed to offset dilution to our common stock in the event of a conversion under the Notes. The note hedge instruments (Note Hedges) have a strike price of $30.03, which is equal to the conversion rate under the Notes, are exercisable by us upon any conversion under the Notes and expire in December 2017. To help offset the cost of the Note Hedges, we also sold warrants (Warrants) in our common stock. The Warrants have a strike price of $40.04, and are exercisable in equal tranches over a 150 day period beginning on March 1, 2018 and ending on October 2, 2018. The Note Hedges and Warrants each cover approximately 6.3 million shares of our common stock, subject to customary anti-dilutive provisions.

We intend to use the net offering proceeds for general corporate purposes which may include the acquisition of businesses or assets, or working capital needs. Refer to Note 10 and 11 of the accompanying unaudited interim financial statements for a complete discussion of these transactions and their accounting implications.

Recent Acquisitions

On February 13, 2013, we acquired Prilos AG (Prilos), a long-time reseller of our document automation products in the German marketplace for cash of €0.5 million (approximately $0.7 million based on exchange rates in effect at the acquisition date).

In October 2012, we acquired the assets of 5280 Dynamic Solutions LLC (5280), a US based software company, in exchange for a cash payment of $1.6 million. The acquisition provides us with new technology with which we intend to expand our product offerings to include SharePoint-based document management solutions for accounts payable automation and other document-centric business needs.

In September 2012, we completed the acquisition of Albany Software Ltd. (Albany), a UK based corporation. We acquired, through a UK subsidiary, all of the Albany outstanding share capital from Albany’s stockholders in exchange for a cash payment of £20 million (approximately $32 million based on exchange rates in effect at the acquisition date). Albany is one of the UK’s leading BACS solution providers, and their solutions are used by more than 5,000 businesses to streamline, automate and manage processes involving the collection of direct debits and electronic payments.

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Financial Highlights

For the nine months ended March 31, 2013, our revenue increased by $26.8 million to $189.7 million from $162.9 million in the same period of fiscal year 2012. This was attributable to revenue increases of $11.6 million in our Banking Solutions segment, $9.0 million in our Payments and Transactional Documents segment and $6.3 million in our Outsourced Solutions segment. The Banking Solutions segment’s revenue increase was primarily the result of our fiscal year 2012 commercial banking acquisition. The increased revenue in our Payments and Transactional Documents segment was related to higher revenue in both North America and Europe, in part due to our Albany acquisition. Legal spend management, SWIFT Access Service and Paymode-X solutions accounted for the majority of the revenue increase in our Outsourced Solutions segment.

We had a net loss of $10.6 million in the nine months ended March 31, 2013 compared to net income of $2.9 million in the nine months ended March 31, 2012. Our net loss for the nine months ended March 31, 2013 included a loss of $4.4 million related to derivative instruments associated with our Notes; there were no similar derivative instruments during the nine months ended March 31, 2012. Our gross margin increased by $11.5 million in the first nine months of fiscal year 2013 related primarily to revenue increases across all segments. The increased gross margin was offset by increased operating expense of $24.7 million which was primarily due to increased expenses related to the integration of recent acquisitions, increased employee related costs and increased intangible asset amortization expense as compared to the same period in the prior year. The increase in operating expenses was also attributable to marketing initiatives to support our new and existing products, particularly our commercial banking and Paymode-X solutions. In addition our operating expenses were impacted by increased development costs as we continue to invest in our SaaS-based solutions that we believe will drive future revenue growth, such as our commercial banking, Paymode-X and legal spend management solutions.

In the first nine months of fiscal year 2013, we derived approximately 37% of our revenue from customers located outside of North America, principally in the UK, continental Europe and Australia. We expect future revenue growth to be driven by increased purchases of our products, including our legal spend management, SWIFT Access Service, Paymode-X and WebSeries solutions, by new and existing bank and financial institution customers in both North America and international markets and from increased sales of our payments and transactional documents products.

Critical Accounting Policies

We believe that several accounting policies are important to understanding our historical and future performance. We refer to these policies as critical because these specific areas generally require us to make judgments and estimates about matters that are uncertain at the time we make the estimate, and different estimates—which also would have been reasonable—could have been used.

The critical accounting policies we identified in our Annual Report on Form 10-K for the fiscal year ended June 30, 2012 related to stock based compensation, revenue recognition, the valuation of goodwill and intangible assets and the valuation of acquired deferred revenue. It is important that the discussion of our operating results that follows be read in conjunction with the critical accounting policies disclosed in our Annual Report on Form 10-K, as filed with the SEC on August 27, 2012 and in conjunction with the discussion of income taxes which follows below.

Income Taxes

We are subject to the income tax laws of the United States (including its states and municipalities) as well as the tax laws of the foreign jurisdictions in which we operate. Our annual tax rate is determined based on our income, statutory tax rates and the tax impact of items treated differently for tax purposes than for financial statement purposes. The income tax expense we record in any interim period is based on our estimated tax rate for the full fiscal year, which requires us to estimate our annual pretax income and tax expense by jurisdiction. This process is inherently subjective and requires us to make estimates relative to our business plans, planning opportunities and operating results. An interim tax rate is subject to adjustment if, in later periods, there are changes to our estimate of total tax expense or pretax income, including income by jurisdiction. We update these estimates on a quarterly basis, so that our interim financial statements reflect our most current projections for the full fiscal year.

Our income tax expense consists of two components: current and deferred. Current tax expense represents our estimate of taxes to be paid for the current period, including income tax expense arising from uncertain tax positions. Deferred tax expense results from changes in deferred tax assets and liabilities between periods. Deferred tax assets and liabilities arise due to differences between when certain transactions are reflected in our financial statements and when those same items are included in a tax return. Deferred tax assets generally reflect the impact of a tax deduction, tax credit or operating loss carryforward that we have available for use in future year tax returns. Deferred tax liabilities generally reflect the impact of a deduction or expenditure that we have already taken in a tax return but that we have not yet reflected in our financial statements.

We record a deferred tax asset if we believe that it is more likely than not that we will realize a future tax benefit. Ultimate realization of any deferred tax asset is dependent on our ability to generate sufficient future taxable income in the appropriate tax jurisdiction before the expiration of carryforward periods, if any. Our assessment of deferred tax asset recoverability considers

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historical and projected operating results, the reversal of existing deferred tax liabilities that provide a source of future taxable income and the availability of tax planning strategies. We establish a valuation allowance against any deferred tax asset for which we are unable to conclude that recoverability is more likely than not. The particularly sensitive component of this evaluation is our projection of future operating results since this relies heavily on our estimates of future revenue and expense levels by tax jurisdiction. The Notes we issued in December 2012 will result in a significant future expense burden for interest expense, in particular non-cash interest expense, as the debt is accreted to the principal amount due on maturity. While we expect to deploy the debt proceeds in a manner that offsets the impact of this expense, if we are unable to do so, all or a portion of our US based deferred tax assets might become impaired which would give rise to the recognition of significant deferred tax expense in the period in which that determination was made. We continuously reassess the recoverability of our deferred tax assets and our conclusion can change at any time.

We establish reserves to remove some or all of the tax benefit we would have otherwise recorded if a tax position is uncertain. In evaluating whether a tax position is uncertain, we base our assessment on existing tax legislation, case law and legal statute. We also presume that the tax position will be examined by the relevant taxing authority that has full knowledge of all relevant information. We recognize tax benefits related to uncertain tax positions at the largest amount deemed more likely than not will be realized upon tax examination. We review our tax positions quarterly and adjust the balances as necessary.

Recent Accounting Pronouncements

In June 2011, the Financial Accounting Standards Board (FASB) issued an accounting standards update regarding the presentation of comprehensive income in financial statements. The provisions of this standard provided an option to present the components of net income or loss and other comprehensive income or loss either as one continuous statement or as two separate but consecutive statements. We incorporated the continuous statement option of this standard effective with the period ending September 30, 2012. This changed the manner in which we present comprehensive income or loss in our overall financial statements, but did not result in any other accounting or financial reporting impact to us.

Results of Operations

Three Months Ended March 31, 2013 Compared to the Three Months Ended March 31, 2012

Segment Information

Operating segments are components of an enterprise for which separate financial information is available that is evaluated regularly by the chief operating decision maker, or decision making group, in deciding how to allocate resources and in assessing performance.

Our operating segments are organized principally by the type of product or service offered and by geography. Similar operating segments have been aggregated into three reportable segments: Payments and Transactional Documents, Banking Solutions and Outsourced Solutions. The following tables represent our segment revenues and our segment measure of profit:

	Three Months Ended March 31,				Increase (Decrease) Between Periods
	2013		2012		2013 Compared to 2012
	(in thousands)				(in thousands)			%
Segment revenue:
Payments and Transactional Documents	$	29,642	$	25,254	$	4,388			17.4
Banking Solutions		17,051		14,051		3,000			21.4
Outsourced Solutions		17,751		16,011		1,740			10.9
Total segment revenue	$	64,444	$	55,316	$	9,128			16.5
Segment measure of profit:
Payments and Transactional Documents	$	7,906	$	5,415	$	2,491			46.0
Banking Solutions		1,336		1,485		(149	)		(10.0	)
Outsourced Solutions		1,530		1,653		(123	)		(7.4	)
Total measure of segment profit	$	10,772	$	8,553	$	2,219			25.9

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A reconciliation of the measure of segment profit to GAAP (loss) income for the three months ended March 31, 2013 and 2012, before the provision for income taxes, is as follows:

	Three Months Ended March 31,
	2013			2012
	(in thousands)
Segment measure of profit	$	10,772		$	8,553
Less:
Amortization of intangible assets		(5,162	)		(3,734	)
Stock compensation expense		(4,591	)		(3,719	)
Acquisition related expenses		(3,165	)		(706	)
Restructuring expenses		(62	)		(509	)
Add:
Gain on derivative instruments, net		482			—
Other (expense) income, net		(3,134	)		119
(Loss) income before income taxes	$	(4,860	)	$	4

Payments and Transactional Documents. The Payments and Transactional Documents segment revenue increased $4.4 million for the three months ended March 31, 2013 as compared to the same period in the prior year as a result of increases of $2.5 million in software license revenue, $0.2 million in subscriptions and transactions revenue and $1.8 million in service and maintenance revenue, partially offset by a decrease in equipment and supplies revenue of $0.1 million. The revenue increases were primarily attributable to increased European revenue as a result of our fiscal 2013 acquisition of Albany and increased software license revenue in the US. The revenue includes an unfavorable effect of foreign exchange rates of $0.2 million associated with the British Pound Sterling which depreciated against the US Dollar when compared to the same period in the prior fiscal year. The segment profit increase of $2.5 million for the three months ended March 31, 2013 was primarily attributable to increased gross margins related to the increased revenue, offset in part by increased operating expenses of $1.5 million, primarily attributable to increased sales and marketing expenses. We expect revenue and profit for the Payments and Transactional Documents segment to increase during the remainder of fiscal year 2013 primarily as a result of our recent acquisition of Albany.

Banking Solutions. Revenues from our Banking Solutions segment increased as compared to the same period in the prior fiscal year due to increases in subscription and transactions revenues of $5.9 million, software license revenue of $0.5 million and maintenance revenue of $0.4 million, offset in part by a decrease in professional services revenue of $3.7 million as a result of the completion of several large projects in the latter part of fiscal year 2012. Segment profit decreased $0.1 million for the three months ended March 31, 2013 as compared to the same period in the prior fiscal year as improved gross margins were offset by increased sales and marketing and product development related costs. The increased sales and marketing and product development costs were primarily related to increased headcount costs related to our commercial banking acquisition. We expect revenue and profit for the Banking Solutions segment to decrease during the remainder of the fiscal year as a result of anticipated customer losses in our commercial banking business and as a result of increased expenses related to the commercial banking hosted infrastructure and sales and marketing efforts. The customer losses have been anticipated as the acquired commercial banking business had been experiencing customer attrition prior to our acquisition, due in large part to customers’ views that the commercial banking solutions required further investment and improvement. The increased infrastructure and sales and marketing expenses are attributable to investments we are making to support, improve and grow the commercial banking business.

Outsourced Solutions. Revenues from our Outsourced Solutions segment increased as compared to the same period in the prior fiscal year due primarily to the increased revenue contributions from our Paymode-X solution of $1.0 million and our legal spend management solution of $0.7 million. The legal spend management solutions revenue growth was driven primarily by volume increases as more customers adopted our SaaS-based platforms. Segment profit decreased $0.1 million as compared to the same period in the prior fiscal year as a result of increased sales and marketing, product development and general and administrative expense. We expect revenue and profit for the Outsourced Solutions segment to increase during the remainder of the fiscal year as a result of the revenue contribution from our legal spend management, Paymode-X and SWIFT Access Service solutions.

Revenues by category

	Three Months Ended March 31,								Increase (Decrease) Between Periods
	2013				2012				2013 Compared to 2012
	(in thousands)		As % of total Revenues		(in thousands)		As % of total Revenues		(in thousands)			%
Revenues:
Subscriptions and transactions	$	28,749		44.6	$	20,374		36.8	$	8,375			41.1
Software licenses		7,048		10.9		4,158		7.5		2,890			69.5
Service and maintenance		26,809		41.6		28,876		52.2		(2,067	)		(7.2	)
Equipment and supplies		1,838		2.9		1,908		3.5		(70	)		(3.7	)
Total revenues	$	64,444		100.0	$	55,316		100.0	$	9,128			16.5

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Subscriptions and Transactions. The increase in subscriptions and transactions revenue was due principally to increases in the revenue contribution from our Banking Solutions segment of $5.9 million and our Paymode-X solution of $1.0 million, and, to a lesser extent, from revenue increases in our legal spend management solution, SWIFT Access Service solution and our payments and document automation products. The increases in the Banking Solutions segment revenues arise primarily from our commercial banking solution, which we acquired in 2012. We expect subscriptions and transactions revenues to increase during the remainder of the fiscal year, primarily as a result of the increased revenue contribution from our legal spend management, Paymode-X and SWIFT Access Service solutions.

Software Licenses. The increase in software license revenue was due to an increase in European payments and document automation products of approximately $1.8 million, increased US revenue for payment and document automation products of $0.7 million and increased revenue in our Banking Solutions segment of $0.5 million, partially offset by a decrease of $0.1 million in our European SWIFT Access Service Solution as compared to the same period in the prior fiscal year. We expect software license revenues to decrease during the remainder of fiscal year 2013, principally as a result of decreased European software license revenue in our Payments and Transactional Documents segment.

Service and Maintenance. The decrease in service and maintenance revenues was primarily the result of a decrease in professional services revenues of $3.7 million associated with the completion of several large banking projects during the latter part of 2012 and decreased revenues from our SWIFT Access Service solution of $0.3 million partially offset by increased European service and maintenance revenue from our payment and document automation products of $1.8 million. We expect that service and maintenance revenues will remain relatively consistent during the remainder of the fiscal year.

Equipment and Supplies. Equipment and supplies revenue remained consistent period over period and we expect that equipment and supplies revenues will remain relatively consistent for the remainder of 2013.

Cost of revenues by category

	Three Months Ended March 31,								Increase (Decrease) Between Periods
	2013				2012				2013 Compared to 2012
	(in thousands)		As % of total Revenues		(in thousands)		As % of total Revenues		(in thousands)			%
Cost of revenues:
Subscriptions and transactions	$	16,851		26.2	$	10,571		19.1	$	6,280			59.4
Software licenses		952		1.5		656		1.2		296			45.1
Service and maintenance		11,081		17.2		13,264		24.0		(2,183	)		(16.5	)
Equipment and supplies		1,383		2.1		1,514		2.7		(131	)		(8.7	)
Total cost of revenues	$	30,267		47.0	$	26,005		47.0	$	4,262			16.4
Gross profit	$	34,177		53.0	$	29,311		53.0	$	4,866			16.6

Subscriptions and Transactions. Subscriptions and transactions costs include salaries and other related costs for our professional services teams as well as costs related to our hosting infrastructure such as depreciation and facilities related expenses. Subscriptions and transactions costs increased to 59% of subscriptions and transactions revenues in the three months ended March 31, 2013 as compared to 52% in the three months ended March 31, 2012. The increase in subscriptions and transactions costs as a percentage of revenue was due primarily to costs related to the integration and migration of customers associated with our fiscal 2012 commercial banking acquisition and lower gross margins associated with our Paymode-X solution as we continue to invest in that product’s hosted infrastructure. We expect that subscriptions and transactions costs will remain relatively consistent as a percentage of subscriptions and transactions revenue during the remainder of the fiscal year.

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Software Licenses. Software license costs consist of expenses incurred by us to manufacture, package and distribute our software products and related documentation and costs of licensing third party software that is incorporated into or sold with certain of our products. Software license costs decreased slightly to 14% of software license revenues in the three months ended March 31, 2013 as compared to 16% for the three months ended March 31, 2012. We expect that software license costs will decrease slightly as a percentage of software license revenues during the remainder of the fiscal year due to the reduction of certain third party costs, particularly in our Banking Solutions segment.

Service and Maintenance. Service and maintenance costs include salaries and other related costs for our customer service, maintenance and help desk support staffs, as well as third party contractor expenses used to complement our professional services team. Service and maintenance costs decreased to 41% of service and maintenance revenues in the three months ended March 31, 2013 as compared to 46% in the three months ended March 31, 2012. The decrease in service and maintenance costs as a percentage of revenue was primarily a result of a decrease in costs related to the recent completion of several large projects in our Banking Solutions segment. We expect that service and maintenance costs will increase slightly as a percentage of service and maintenance revenues during the remainder of the fiscal year.

Equipment and Supplies. Equipment and supplies costs include the costs associated with equipment and supplies that we resell, as well as freight, shipping and postage costs associated with the delivery of our products. Equipment and supplies costs decreased to 75% of equipment and supplies revenues in the three months ended March 31, 2013 as compared to 79% for the three months ended March 31, 2012. The cost decrease as a percentage of revenues is primarily related to a higher mix of higher margin transactions. We expect that equipment and supplies costs will remain relatively consistent as a percentage of equipment and supplies revenues for the remainder of the fiscal year.

Operating Expenses

	Three Months Ended March 31,								Increase Between Periods
	2013				2012				2013 Compared to 2012
	(in thousands)		As % of total Revenues		(in thousands)		As % of total Revenues		(in thousands)		%
Operating expenses:
Sales and marketing	$	16,215		25.2	$	12,536		22.6	$	3,679		29.3
Product development and engineering		8,454		13.1		7,496		13.6		958		12.8
General and administrative		6,554		10.2		5,660		10.2		894		15.8
Amortization of intangible assets		5,162		8.0		3,734		6.8		1,428		38.2
Total operating expenses	$	36,385		56.5	$	29,426		53.2	$	6,959		23.6

Sales and Marketing. Sales and marketing expenses consist primarily of salaries and other related costs for sales and marketing personnel, sales commissions, travel, public relations and marketing materials and trade show participation. Sales and marketing expenses increased in the three months ended March 31, 2013 as compared to the three months ended March 31, 2012 primarily the result of an increase in employee related costs of $3.2 million and increased travel related expenses of $0.2 million. We expect that sales and marketing expenses will remain consistent over the remainder of the fiscal year as we continue to focus on our marketing initiatives to support our new and existing products, particularly our commercial banking products and Paymode-X.

Product Development and Engineering. Product development and engineering expenses consist primarily of personnel costs to support product development which consists of enhancements and revisions to our products based on customer feedback and general marketplace demands. The increase in product development and engineering expenses in the three months ended March 31, 2013 as compared to the three months ended March 31, 2012 was primarily attributable to an increase in employee related costs of $0.9 million and third party professional services costs of $0.3 million which augmented existing resources to drive increased product development and enhancement initiatives. We expect that product development and engineering expenses will remain relatively consistent during the remainder of the fiscal year as we continue to invest in our SaaS-based solutions that we believe will drive future revenue growth, such as our commercial banking, Paymode-X and legal spend management solutions.

General and Administrative. General and administrative expenses consist primarily of salaries and other related costs for operations and finance employees and legal and accounting services. General and administrative expenses increased in the three months ended March 31, 2013 as compared to the three months ended March 31, 2012 primarily due to increases in employee related costs of $0.9 million and an increase in acquisition and restructuring related costs of $0.2 million as a result of our recent acquisitions. We expect that general and administrative expenses will remain relatively consistent during the remainder of the fiscal year.

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Amortization of Intangible Assets. We amortize our intangible assets in proportion to the estimated rate at which the asset provides economic benefit to us. Accordingly, amortization expense rates are often higher in the earlier periods of an asset’s estimated life. The increase in amortization expense in the quarter ended March 31, 2013 as compared to the quarter ended March 31, 2012 occurred as a result of increased expense from intangible assets associated with our recent acquisitions. We expect that total amortization expense for fiscal year 2013 will approximate $19.5 million.

Gain (loss) on Derivative Instruments

	Three Months Ended March 31,				Increase Between Periods
	2013		2012		2013 Compared to 2012
	(in thousands)						%
Gain (loss) on derivative instruments, net	$	482	$	—	$	482		—

Gain (loss) on Derivative Instruments, net. During the three months ended March 31, 2013 we recorded a net gain of $0.5 million related to changes in fair value of derivative instruments associated with our Notes; there were no similar derivative instruments during the three months ended March 31, 2012. As of March 31, 2013 all of our derivative instruments met the classification requirements for inclusion within stockholders equity and as such are not subject to on-going fair value re-measurement. Accordingly, we do not anticipate recognizing additional gains or losses related to changes in the fair value of these instruments. We are required, for the remaining term of the Notes, to assess whether we continue to meet the stockholders equity classification requirements. If in any future period we fail to satisfy those requirements we would need to reclassify the derivative instruments out of stockholders equity, to either assets or liabilities depending on their nature, and record those instruments at fair value with changes in fair value reflected in earnings.

Other (Expense) Income, Net

	Three Months Ended March 31,						Increase (Decrease) Between Periods
	2013			2012			2013 Compared to 2012
	(in thousands)									%
Interest income	$	157		$	124		$	33			26.6
Interest expense		(3,402	)		(8	)		(3,394	)		(42,425.0	)
Other expense, net		111			3			108			3,600.0
Other (expense) income, net	$	(3,134	)	$	119		$	(3,253	)		(2,733.6	)

Other (Expense) Income, Net. In the three months ended March 31, 2013 as compared to the three months ended March 31, 2012, interest income increased slightly as a result of increased cash balances. Interest expense increased as a result of interest expense related to our Notes and consisted of cash interest expense of $0.7 million, amortization of debt discount of $2.4 million and amortization of debt issuance costs of $0.3 million. The increase in other expense is the result of an increase in foreign exchange gains in the three months ended March 31, 2013 as compared to the three months ended March 31, 2012. We expect that interest expense will increase during the remainder of fiscal year 2013 as a result of our Notes.

Provision for Income Taxes

We recorded an income tax benefit of $1.3 million and income tax expense of $1.3 million for the three months ended March 31, 2013 and 2012, respectively. The tax benefit for the quarter ended March 31, 2013 arose principally from a tax benefit recorded for our US operations, offset in part by tax expense associated with our UK and Australian operations. The tax benefit recorded for the quarter ended March 31, 2013 also included a tax benefit of $0.3 million resulting from the enactment on January 2, 2013 of the American Taxpayer Relief Act of 2012, which retroactively extended the US research and development credit for two years beginning January 1, 2012. The income tax expense recorded for the quarter ended March 31, 2012 was attributable to our UK, Australian, and US operations.

We currently anticipate that our unrecognized tax benefits will decrease within the next twelve months by approximately $0.1 million as a result of the expiration of certain statutes of limitations associated with intercompany transactions subject to tax in multiple jurisdictions.

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Nine Months Ended March 31, 2013 Compared to the Nine Months Ended March 31, 2012

Segment Information

The following tables represent our segment revenues and our segment measure of profit:

	Nine Months Ended March 31,				Increase (Decrease) Between Periods
	2013		2012		2013 Compared to 2012
	(in thousands)				(in thousands)			%
Segment revenue:
Payments and Transactional Documents	$	84,050	$	75,063	$	8,987			12.0
Banking Solutions		52,025		40,438		11,587			28.7
Outsourced Solutions		53,667		47,385		6,282			13.3
	$	189,742	$	162,886	$	26,856			16.5
Segment measure of profit:
Payments and Transactional Documents	$	21,274	$	17,574	$	3,700			21.1
Banking Solutions		4,170		6,371		(2,201	)		(34.5	)
Outsourced Solutions		6,206		6,888		(682	)		(9.9	)
Total measure of segment profit	$	31,650	$	30,833	$	817			2.6

A reconciliation of the measure of segment profit to our GAAP (loss) income for the nine months ended March 31, 2013 and 2012, before the provision for income taxes, is as follows:

	Nine Months Ended March 31,
	2013			2012
	(in thousands)
Segment measure of profit	$	31,650		$	30,833
Less:
Amortization of intangible assets		(14,675	)		(11,051	)
Stock compensation expense		(13,532	)		(10,257	)
Acquisition related expenses		(7,445	)		(1,007	)
Restructuring expenses		(1,192	)		(560	)
Add:
Loss on derivative instruments, net		(4,435	)		—
Other (expense) income, net		(3,673	)		34
(Loss) income before income taxes	$	(13,302	)	$	7,992

Payments and Transactional Documents. The revenue increase of $9.0 million for the nine months ended March 31, 2013 was primarily attributable to increased software license revenue of $4.7 million, increased service and maintenance revenue of $3.7 million and increased subscriptions and transactions revenue of $0.6 million. The increased revenue includes the favorable effect of foreign exchange rates of $0.2 million. The segment profit increase of $3.7 million for the nine months ended March 31, 2013 was attributable to improved gross margins of $7.4 million related primarily to the increased revenue, which was offset in part by increased sales and marketing expenses of $2.9 million and increased product development expenses of $0.8 million.

Banking Solutions. Revenues from our Banking Solutions segment increased $11.6 million as compared to the same period in the prior fiscal year due to an increase in subscriptions and transactions revenue of $22.5 million primarily related to our fiscal year 2012 commercial banking acquisition and an increase of $0.9 million in maintenance revenue which was partially offset by a decrease in professional services revenue of $11.8 million as a result of the completion of several large ongoing banking projects. The profit decrease of $2.2 million was primarily due to increased operating expenses of $9.6 million offset in part by improved gross margins of $7.4 million. The increased operating expenses are primarily the result of increased infrastructure and sales and marketing expenses attributable to investments we are making to support, improve and grow the commercial banking business.

Outsourced Solutions. Revenues from our Outsourced Solutions segment increased $6.3 million as compared to the same period in the prior fiscal year due primarily to an increase in the revenue contribution from our legal spend management solutions of $2.0 million, our SWIFT Access Service solution of $1.2 million and our Paymode-X solution of $3.4 million. The segment profit decreased $0.7 million for the nine months ended March 31, 2013 compared to the same period in the prior year, as a result of lower gross margins related to our Paymode-X solution and increased sales and marketing and product development expenses.

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Revenues by category

	Nine Months Ended March 31,								Increase (Decrease) Between Periods
	2013				2012				2013 Compared to 2012
	(in thousands)		As % of total Revenues		(in thousands)		As % of total Revenues		(in thousands)			%
Revenues:
Subscriptions and transactions	$	87,657		46.2	$	57,022		35.0	$	30,635			53.7
Software licenses		17,216		9.1		12,593		7.7		4,623			36.7
Service and maintenance		78,999		41.6		87,392		53.7		(8,393	)		(9.6	)
Equipment and supplies		5,870		3.1		5,879		3.6		(9	)		(0.2	)
Total revenues	$	189,742		100.0	$	162,886		100.0	$	26,856			16.5

Subscriptions and Transactions. The increase in subscriptions and transactions revenues of $30.6 million was due principally to an increase in revenue from our Banking Solutions segment of $22.5 million, our Outsourced Solutions segment of $7.5 million (which includes increased revenue from our legal spend management solution of $2.1 million, SWIFT Access Service of $2.1 million, and Paymode-X solution of $3.4 million) and the revenue increase from our Payments and Transactional Documents segment of $0.6 million. The increase in revenues from our Banking Solutions segment is primarily attributable to our fiscal year 2012 commercial banking acquisition.

Software Licenses. The increase in software license revenues was due to an increase in European revenue of $2.9 million from certain of our payment and document automation products, partially the result of our acquisition of Albany and $1.8 million in US revenues in our payment and document automation products.

Service and Maintenance. The decrease in service and maintenance revenues was primarily the result of decreased professional services revenues within our Banking Solutions segment of $11.8 million associated with the recent completion of several large banking projects and decreased European service and maintenance revenues of $1.0 million in our Outsourced Solutions segment, partially offset by increased revenue from our Payments and Transactional Documents segment of $3.7 million primarily a result of our acquisition of Albany and increased maintenance revenue of $0.8 million associated with our Banking Solutions Segment.

Equipment and Supplies. Revenues were consistent period over period.

Cost of revenues by category

	Nine Months Ended March 31,								Increase (Decrease) Between Periods
	2013				2012				2013 Compared to 2012
	(in thousands)		As % of total Revenues		(in thousands)		As % of total Revenues		(in thousands)			%
Cost of revenues:
Subscriptions and transactions	$	47,075		24.8	$	28,576		17.5	$	18,499			64.7
Software licenses		1,978		1.0		1,620		1.0		358			22.1
Service and maintenance		35,352		18.6		38,663		23.7		(3,311	)		(8.6	)
Equipment and supplies		4,445		2.4		4,650		2.9		(205	)		(4.4	)
Total cost of revenues	$	88,850		46.8	$	73,509		45.1	$	15,341			20.9
Gross profit	$	100,892		53.2	$	89,377		54.9	$	11,515			12.9

Subscriptions and Transactions. Subscriptions and transactions costs increased to 54% of subscriptions and transactions revenues in the nine months ended March 31, 2013 as compared to 50% in the nine months ended March 31, 2012. The increase in subscriptions and transactions costs as a percentage of revenue was due primarily to increased costs in our Banking Solutions segment related to the integration and migration of our commercial banking customers and lower gross margins from our Paymode-X solution, partially offset by lower costs in our SWIFT Access Service solution.

26

Software Licenses. Software license costs remained relatively consistent at 11% of software license revenues in the nine months ended March 31, 2013 as compared to 13% for the nine months ended March 31, 2012.

Service and Maintenance. Service and maintenance costs remained consistent as a percentage of service and maintenance revenues at 45% in the nine months ended March 31, 2013 as compared to 44% for the nine months ended March 31, 2012.

Equipment and Supplies. Equipment and supplies costs decreased to 76% of equipment and supplies revenues in the nine months ended March 31, 2013 as compared to 79% of equipment and supplies revenues in the nine months ended March 31, 2012 as a result of a slight decrease in costs in our payments and transactional document products segment.

Operating Expenses

	Nine Months Ended March 31,								Increase Between Periods
	2013				2012				2013 Compared to 2012
	(in thousands)		As % of total revenues		(in thousands)		As % of total revenues		(in thousands)		%
Operating expenses:
Sales and marketing	$	46,643		24.6	$	35,503		21.8	$	11,140		31.4
Product development and engineering		25,186		13.3		19,360		11.9		5,826		30.1
General and administrative		19,582		10.3		15,505		9.5		4,077		26.3
Amortization of intangible assets		14,675		7.7		11,051		6.8		3,624		32.8
Total operating expenses	$	106,086		55.9	$	81,419		50.0	$	24,667		30.3

Sales and Marketing. Sales and marketing expenses increased $11.1 million in the nine months ended March 31, 2013 as compared to the nine months ended March 31, 2012 as a result of an increase in employee related costs of $8.7 million, primarily due to the impact of our recent acquisitions and increased costs in our Banking Solutions segment, as well as increased travel related expenses of $0.7 million, increased professional services and contract employee expense of $0.4 million, increased acquisition related expenses of $0.3 million and increased restructuring charges of $0.2 million.

Product Development and Engineering. The increase in product development and engineering expenses was primarily attributable to increased employee related costs of $4.2 million, increased professional services and contract employee expense of $1.1 million.

General and Administrative. The increase in general and administrative expenses of $4.1 million was principally attributable to an increase in employee related costs of $2.4 million, acquisition related costs of $1.6 million and restructuring costs of $0.4 million, partially offset by a decrease in contract employees.

Amortization of Intangible Assets. We amortize our intangible assets in proportion to the estimated rate at which the asset provides economic benefit to us. Accordingly, amortization expense rates are often higher in the earlier periods of an asset’s estimated life. The increase in amortization expense in the nine months ended March 31, 2013 as compared to the nine months ended March 31, 2012 occurred as a result of increased expense from intangible assets associated with our recent acquisitions.

Gain (loss) on Derivative Instruments

	Nine Months Ended March 31,					(Decrease) Between Periods
	2013			2012		2013 Compared to 2012
	(in thousands)								%
Gain (loss) on derivative instruments, net	$	(4,435	)	$	—	$	(4,435	)		—

Gain (loss) on Derivative Instruments, net. During the nine months ended March 31, 2013 we recorded a net loss of $4.4 million related to changes in fair value of derivative instruments associated with our Notes; there were no similar derivative instruments during the nine months ended March 31, 2012. As of March 31, 2013 all of our derivative instruments met the classification requirements for inclusion within stockholders equity and as such are not subject to on-going fair value re-measurement. Accordingly, we do not anticipate recognizing additional gains or losses related to changes in the fair value of these instruments. We are required, for the remaining term of the Notes, to assess whether we continue to meet the stockholders equity classification requirements. If in

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any future period we fail to satisfy those requirements we would need to reclassify the derivative instruments out of stockholders equity, to either assets or liabilities depending on their nature, and record those instruments at fair value with changes in fair value reflected in earnings.

Other (Expense) Income, Net

	Nine Months Ended March 31,						Increase (Decrease) Between Periods
	2013			2012			2013 Compared to 2012
	(in thousands)									%
Interest income	$	435		$	367		$	68			18.5
Interest expense		(4,106	)		(28	)		(4,078	)		(14,564.3	)
Other expense, net		(2	)		(305	)		303			99.3
Other expense, net	$	(3,673	)	$	34		$	(3,707	)		(10,902.9	)

Other (Expense) Income, Net. For the nine months ended March 31, 2013 as compared to the nine months ended March 31, 2012, interest income increased slightly as a result of increased cash balances. Interest expense increased as a result of interest expense related to our Notes and consisted of cash interest expense of $0.9 million, amortization of debt discount of $2.9 million and amortization of debt issuance costs of $0.4 million. The increase in other expense is the result of a decrease in foreign exchange losses in the nine months ended March 31, 2013 as compared to the nine months ended March 31, 2012.

Provision for Income Taxes

We recorded an income tax benefit of $2.7 million and income tax expense of $5.1 million for the nine months ended March 31, 2013 and 2012, respectively. The tax benefit for the nine months ended March 31, 2013 arose principally from a tax benefit recorded for our US operations, offset in part by tax expense associated with our UK and Australian operations. The tax benefit recorded for the nine months ending March 31, 2013 also included a tax benefit of $0.3 million resulting from the enactment on January 2, 2013 of the American Taxpayer Relief Act of 2012, which retroactively extended the US research and development credit for two years beginning January 1, 2012. The income tax expense for the nine months ended March 31, 2012 was primarily attributable to our UK, Australian and US operations.

We currently anticipate that our unrecognized tax benefits will decrease within the next twelve months by approximately $0.1 million as a result of the expiration of certain statutes of limitations associated with intercompany transactions subject to tax in multiple jurisdictions.

Liquidity and Capital Resources

Overview

We have financed our operations primarily from cash provided by operating activities and the sale of our common stock and, with the issuance of the Notes in December 2012, with debt proceeds. We have generated positive operating cash flows in each of our last eleven completed fiscal years. Accordingly, we believe that the cash generated from our operations and the cash and cash equivalents we have on hand will be sufficient to meet our operating requirements for the foreseeable future.

In December 2012, we completed an underwritten public offering of $189.8 million aggregate principal amount of our 1.50% Convertible Senior Notes due December 1, 2017, (see Note 10). There are no restrictive covenants associated with these Notes. In connection with the Notes we also entered into convertible note hedge instruments at a purchase cost of $42.3 million, and sold warrants for proceeds of $25.8 million.

In addition to our operating requirements, we will require cash to pay interest on the Notes and to make principal payments on the Notes at maturity or upon conversion. As of January 17, 2013, we are permitted to settle any conversion obligation under the Notes in excess of the principal balance in either cash, shares of our common stock or a combination of cash and shares of our common stock, at our election. We intend to satisfy any conversion premium by issuing shares of our common stock. We believe that the cash generated from our operations and the cash and cash equivalents we have on hand will be sufficient to meet our future obligations. If our existing cash resources along with cash generated from operations is insufficient to satisfy our funding requirements we may need to sell additional equity or debt securities or seek other financing arrangements. Although we believe based on our operations today that we would be successful in obtaining additional financing, we cannot be certain that financing alternatives will be available in amounts or at terms that are acceptable to us, or available to us at all.

In March 2013 we made an investment of $3.0 million in a privately held technology company.

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On February 13, 2013, we acquired Prilos for cash of €0.5 million (approximately $0.7 million based on exchange rates in effect at the acquisition date).

On October 25, 2012, we acquired the assets of 5280 in exchange for a cash payment of $1.6 million.

On September 11, 2012, we completed the acquisition of Albany for a cash payment of £20 million (approximately $32 million based on exchange rates in effect at the acquisition date).

One of our goals is to maintain and improve our capital structure. The key metrics we focus on in assessing the strength of our liquidity and a summary of our cash activity for the nine months ended March 31, 2013 and 2012 are summarized in the tables below:

	March 31,			June 30,
	2013			2012
	(in thousands)
Cash, cash equivalents and marketable securities	$	284,036		$	124,862
	Nine Months Ended March 31,
	2013			2012
	(in thousands)
Cash provided by operating activities	$	30,347		$	23,334
Cash used in investing activities		(40,924	)		(32,844	)
Cash provided by financing activities		171,257			16,102
Effect of exchange rates on cash		(1,508	)		(273	)

Cash, cash equivalents and marketable securities. At March 31, 2013 our cash and cash equivalents consisted primarily of cash deposits held at major banks, money market funds and marketable securities. The increase in cash, cash equivalents and marketable securities at March 31, 2013 from June 30, 2012 was primarily due to the net proceeds received under our convertible debt issuance in December 2012 of $167.3 million and $30.3 million of cash generated from operations. This was offset in part by the use of $33.3 million in cash related to business acquisitions we completed during the nine months ended March 31, 2013 and $7.7 million used to purchase property and equipment.

Cash, cash equivalents and marketable securities included $58.0 million held by our foreign subsidiaries as of March 31, 2013, of which $19.9 million would be subject to US tax rates if we sought to use those amounts to fund domestic operations. We intend to continue to permanently reinvest our earnings from foreign subsidiaries, and we currently do not anticipate that we will need funds generated from foreign subsidiaries to fund our domestic operations. If in the future we were to change our intention with respect to permanent reinvestment of earnings from our foreign subsidiaries, any foreign earnings that had previously not been taxed in the US would generally become subject to US tax at statutory rates. Cash and cash equivalents held by our foreign subsidiaries are denominated in currencies other than US Dollars. Accordingly, decreases in the foreign currency exchange rates of the British Pound Sterling to the US Dollar decreased our overall cash balances by approximately $1.5 million in the nine months ended March 31, 2013. Further changes in the foreign currency exchange rates of these currencies could have a significant effect on our overall cash balances. However, we continue to believe that our existing cash balances, even in light of the foreign currency volatility we frequently experience, are adequate to meet our operating requirements for the foreseeable future.

Operating Activities. Cash generated from operating activities primarily relates to our net income, less the impact of non-cash expenses and changes in working capital. Cash generated from operations increased by $7.0 million during the nine months ended March 31, 2013 as compared to the same period in the prior year. The increase was due to favorable adjustments related to non-cash expenses for amortization of intangibles, debt issue costs and our debt discount, loss on derivatives and stock compensation expense. The increase was also due to a decrease in cash used in accounts receivable of $4.1 million, an increase in cash provided by deferred revenue of $3.2 million, an increase in cash provided by other assets of $1.7 million, an increase in cash provided by prepaid assets of $0.7 million and a decrease in cash used for accounts payable of $0.6 million, which was offset in part by a decrease in cash provided by deferred income taxes of $7.5 million when compared to the same period in the prior year.

At March 31, 2013, a portion of the deferred tax assets associated with our US and European operations have been reserved since, given the available evidence, it was deemed more likely than not that these deferred tax assets would not be realized.

At March 31, 2013, we had US net operating loss carryforwards of $60.2 million, which expire at various times through the year 2033 and foreign net operating loss carryforwards (primarily in Europe) of $8.2 million, which have no statutory expiration date. We also have approximately $3.3 million of research and development tax credit carryforwards available which expire at various points through the year 2033. Our operating losses and tax credit carryforwards may be subject to limitations under provisions of the Internal Revenue Code.

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Investing Activities. The increase in net cash used in investing activities for the nine months ended March 31, 2013 compared to the nine months ended March 31, 2012 was predominantly due to the $33.3 million of cash used to fund current year acquisitions as compared to the $27.4 million of cash used during the nine months ended March 31, 2013 and a $2.2 million increase in cash used to purchase property and equipment.

Financing Activities. The increase in cash inflows from financing activities relates primarily to the proceeds, net of debt issuance costs, received from our issuance of the Notes of $183.9 million, offset in part by net cash used of $16.6 million related to our purchase of Note Hedges and a sale of Warrants in connection with the Notes.

Off-Balance Sheet Arrangements

During the nine months ended March 31, 2013, we did not engage in material off-balance sheet activities, including the use of structured finance, special purpose or variable interest entities, material trading activities in non-exchange traded commodity contracts or transactions with persons or entities that benefit from their non-independent relationship with us.

Contractual Obligations

Following is a summary of future payments that we are required to make under existing contractual obligations as of March 31, 2013:

	Payments Due by Period *
	Total		Less Than 1 Year		1-3 Years		4-5 Years		More Than 5 Years
	(in thousands)
Convertible senior notes	$	189,750	$	—	$	—	$	189,750	$	—
Interest on convertible senior notes		14,144		1,573		8,539		4,032		—
Operating lease obligations		19,848		776		7,959		4,371		6,742
Capital lease obligations (inclusive of interest)		23		23		—		—		—
Other contractual obligations		8,598		3,005		4,680		913		—
Total	$	232,363	$	5,377	$	21,178	$	199,066	$	6,742

* Payment due dates are calculated from our most recent fiscal year end of June 30, 2012.

Purchase orders are not included in the table above. Our purchase orders represent authorizations to purchase rather than binding agreements. The contractual obligation amounts in the table above are associated with agreements that are enforceable and legally binding and that specify all significant terms, including: fixed or minimum services to be used; fixed, minimum or variable price provisions; and the approximate timing of the transaction. Obligations under contract that we can cancel without a significant penalty are not included in the table above. Also excluded from the table is our estimate of unrecognized tax benefits as of March 31, 2013 in the amount of $0.9 million. The unrecognized tax benefits have been excluded because, as of March 31, 2013, we are unable to estimate the timing of future cash outflows, if any, associated with these liabilities as we do not currently anticipate settling any of these liabilities with cash payment in the foreseeable future.

Item 3. Quantitative and Qualitative Disclosures about Market Risk

We are exposed to a variety of risks, including foreign currency exchange rate fluctuations. We have not entered into any foreign currency hedging transactions or other instruments to minimize our exposure to foreign currency exchange rate fluctuations nor do we presently plan to in the future. Also, we have not entered into any interest rate swap agreements, or other instruments to minimize our exposure to interest rate fluctuations.

We are exposed to new risks, discussed below, that are specific to our convertible note offering and the financial instruments included as part of that transaction, which we completed in December 2012. Other than the new market risks related to the convertible notes, there has been no material change to our exposure to market risk from that which was disclosed in our Annual Report on Form 10-K, as filed with the SEC on August 27, 2012.

Interest rate risk

Our exposure to interest rate risk in relation to our Notes is limited as we have a fixed interest rate. The Notes bear interest at 1.50% per annum, on the principal balance of $189.8 million, and mature on December 1, 2017.

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Derivative Instruments

At March 31, 2013, we were a party to various derivative instruments arising from the Notes issuance. Prior to January 17, 2013, these instruments were recorded on our balance sheet at fair value and changes in fair value were reflected in earnings. Specifically, Note Hedges which were recorded as derivative assets and the Conversion Feature which was recorded as a derivative liability. As of January 17, 2013, due to an increase in the authorized number of shares of our common stock as approved by our shareholders, these derivative instruments met the requirements for classification within stockholders equity. After a final fair value re-measurement on January 17, 2013, the derivative instruments were reclassified to stockholders equity, net of tax. We are required, however, for the remaining term of the Notes, to assess whether we continue to meet the stockholders equity classification requirements and if in any future period we fail to satisfy those requirements we would need to reclassify these instruments out of stockholders equity and back into a derivative asset or liability, at which point we would again be required to record any changes in fair value through earnings.

For the three and nine months ending March 31, 2013, we recorded a net gain of $0.5 million and a net loss of $4.4 million, respectively, based on the change in fair value of our derivative instruments.

Item 4. Controls and Procedures

Our management, with the participation of our chief executive officer and chief financial officer, evaluated the effectiveness of our disclosure controls and procedures as of March 31, 2013. The term disclosure controls and procedures, as defined in Rules 13a-15(e) and 15d-15(e) under the Exchange Act, means controls and other procedures of a company that are designed to ensure that information required to be disclosed by a company in the reports that it files or submits under the Exchange Act is recorded, processed, summarized and reported within the time periods specified in the SEC’s rules and forms. Disclosure controls and procedures include, without limitation, controls and procedures designed to ensure that information required to be disclosed by a company in the reports that it files or submits under the Exchange Act is accumulated and communicated to the company’s management, including its principal executive and principal financial officers as appropriate, to allow timely decisions regarding required disclosure. Management recognizes that any controls and procedures, no matter how well designed and operated, can provide only reasonable assurance of achieving their objectives and management necessarily applies its judgment in evaluating the cost-benefit relationship of possible controls and procedures. Based on the evaluation of our disclosure controls and procedures as of March 31, 2013, our chief executive officer and chief financial officer concluded that, as of such date, our disclosure controls and procedures were effective at the reasonable assurance level.

No change in our internal control over financial reporting (as defined in Rules 13a-15(f) and 15d-15(f) under the Exchange Act) occurred during the fiscal quarter ended March 31, 2013 that has materially affected, or is reasonably likely to materially affect, our internal control over financial reporting.

PART II. OTHER INFORMATION

Item 1. Legal Proceedings

On June 29, 2012, ACI Worldwide, Inc. (ACI) filed a lawsuit in the Superior Court of Fulton County, Georgia against us and one of our employees alleging, among other things, tortious interference with contract and business relations, unjust enrichment and violation of the Georgia Trade Secrets Act of 1990, in connection with our hiring of several former ACI employees. The complaint sought injunctive relief, costs and unspecified monetary damages. This lawsuit was subsequently removed to the U.S. District Court for the Northern District of Georgia, Atlanta Division. The lawsuit was settled by the parties on January 21, 2013 and the case was dismissed with prejudice on February 4, 2013. The lawsuit and the settlement did not have a material adverse effect on our financial statements.

On February 12, 2013 R&N Check Corp (R&N) filed a lawsuit against us in the Superior Court of Rockingham County, New Hampshire. The lawsuit alleges breach of contract in connection with a patent purchase and settlement agreement that we entered into in January 2006 and seeks unspecified damages and recovery of legal costs. On March 18, 2013 we removed the lawsuit to the United States District Court for the District of New Hampshire and R&N thereafter filed a motion to remand to the New Hampshire state court. We intend to vigorously defend ourselves in this matter and do not currently believe that the outcome of this action will have a material adverse consequence on our financial statements.

Item 1A. Risk Factors

Investing in our common stock involves a high degree of risk. You should carefully consider the risks and uncertainties described below before making an investment decision involving our common stock. The risks and uncertainties described below are not the only ones facing us. Additional risks and uncertainties may also impair our business operations.

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If any of the following risks actually occur, our business, financial condition or results of operations would likely suffer. In that case, the trading price of our common stock could fall, and you may lose all or part of the money you paid to buy our common stock.

The risk factors below include new risk factors that are specific to our convertible note offering completed in December 2012, which is discussed in Notes 10 and 11 to our consolidated financial statements and in Management’s Discussion and Analysis of Financial Condition and Results of Operations above. Other than the risk factors related to the convertible notes, these risk factors do not reflect material changes from the risk factors disclosed in Part I, Item 1A. “Risk Factors” in our Annual Report on Form 10-K for the year ended June 30, 2012. The risk factors related to the convertible notes do not reflect material changes from the risk factors disclosed on Form 8-K filed with the SEC on December 13, 2012.

Continuing weakness or deterioration in domestic and global economic conditions could have a significant adverse impact on our business, financial condition and operating results

Our business, financial condition and operating results could be significantly affected by general economic conditions. The US and global economies have experienced a significant prolonged downturn and prospects for sustained economic recovery remain uncertain. In particular, the European Union continues to face significant economic challenges, which could impede the recovery of the worldwide economy. Prolonged economic weakness or a downturn in the US and global economies could result in a variety of risks to our business, including:

• increased volatility in our stock price;

• increased volatility in foreign currency exchange rates;

• delays in, or curtailment of, purchasing decisions by our customers or potential customers either as a result of continuing economic uncertainty or as a result of their inability to access the liquidity necessary to engage in purchasing initiatives;

• pricing pressures for our products and services, including reductions in the duration or renewal rates for our subscription and transaction based customer contracts;

• increased credit risk associated with our customers or potential customers, particularly those that may operate in industries or geographic regions most affected by the economic downturn; and

• impairment of our goodwill or other assets.

To the extent that economic conditions remain uncertain or deteriorate further, or any of the above risks occur, our business and operating results could be significantly and adversely affected.

Our common stock has experienced and may continue to undergo significant market price and volume fluctuations

The market price of our common stock has experienced and may continue to undergo extreme fluctuations due to a variety of factors, including:

• general and industry-specific business, economic and market conditions;

• changes in or our failure to meet analysts’ or investors’ estimates or expectations;

• actual or anticipated fluctuations in operating results, including those arising as a result of any impairment of goodwill or other intangible assets related to past or future acquisitions;

• public announcements concerning us, including announcements regarding litigation, our competitors or our industry;

• publication of research by securities or industry analysts about us and our business;

• introductions of new products or services or announcements of significant contracts by us or our competitors;

• acquisitions, divestitures, strategic partnerships, joint ventures, or capital commitments by us or our competitors;

• adverse developments in patent or other proprietary rights; and

• announcements of technological innovations by our competitors.

As a result of our commercial banking acquisition in March 2012, we entered a new customer market and are broadening our solution set to address the unique customer demands of this market; these initiatives will require significant investment and may not be successful

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In March 2012, we acquired substantially all of the assets and related operations of Intuit Inc.’s (Intuit) commercial banking business. In connection with this acquisition, we are broadening our overall banking business in a number of important ways, including:

• broadening our overall solution set to include a focus on medium-sized and small banks and financial institutions, an initiative that will require significant product investment;

• accelerating the development of our overall solution set to SaaS-based offerings, which will require ongoing investment in our hosted infrastructure, including data security and disaster recovery capabilities; and

• growing our global sales and marketing resources to be able to capitalize on the significant customer opportunity that we see in these markets.

The investment required to support these initiatives may adversely affect our operating results, particularly in the short term.

In addition, the commercial banking business that we acquired had been experiencing customer attrition due in large part to customers’ views that the product required further investment and improvement. While we believe that the investment we are making in the commercial banking business will ultimately address this underlying concern, there is a risk that customer attrition will continue to occur, particularly in the short term. If we are unable to bring to market a commercial banking solution that addresses these concerns, or if the initiatives described above are unsuccessful in retaining existing customers, securing new customers and growing our revenues, our operating results would likely be adversely affected.

We continue to make significant investments in existing products and new product offerings, which can adversely affect our operating results; these investments may not be successful

We operate in a highly competitive and rapidly evolving technology environment and believe that it is important to enhance our existing product offerings as well as to develop new product offerings to meet strategic opportunities as they evolve. Our operating results have recently been affected by increases in product development expenses as we have continued to make investments in our hosted, banking and accounts payable automation products. We may at any time, based on product needs or marketplace demands, decide to significantly increase our product development expenditures. We expect to continue to make significant investments in our Paymode-X, legal spend management, transaction banking and our commercial banking products during fiscal year 2013. Investments in existing products and new product offerings can have a negative impact on our operating results and any new product enhancement or offering may not be accepted in the marketplace or generate material revenues.

Our future financial results will be affected by our success in selling our products in a subscription and transaction or SaaS-based revenue model, which carries with it certain risks

A substantial portion of our revenues and profitability were historically generated from perpetual software license revenues, however we are offering a growing number of our products under a subscription and transaction based revenue model. We believe this model has certain advantages over a perpetual license model, including better predictability of revenue; however, it also presents a number of risks to us, including the following:

• arrangements entered into on a subscription and transaction basis generally delay the timing of revenue recognition and often require the incurrence of up-front costs, which can be significant;

• subscription and transaction based revenue arrangements often include specific performance requirements or service levels that we may be unable to consistently achieve, subjecting us to penalties or other costs. Further, a material breach by us, such as a persistent failure to achieve required service levels, might permit the customer to exit the contract prior to its expiration, without additional compensation to us;

• customer retention is critical to our future growth rates. Customers in a subscription and transaction arrangement may elect not to renew their contractual arrangement with us upon expiration, or they may attempt to renegotiate pricing or other contractual terms at the point of (or prior to) renewal on terms that are less favorable to us; and

• there is no assurance that the solutions we offer on a subscription and transaction basis, including new revenue models that we may introduce, will receive broad marketplace acceptance, in which case our financial results could be materially and adversely affected.

Security breaches could have a significant adverse effect on our business

In the course of providing services to our customers, we collect, store, process and transmit highly sensitive and confidential information. Certain of our solutions also facilitate the transfer of cash. Our products, particularly our SaaS and Web-based offerings, may be vulnerable to unauthorized access, computer viruses, cyber-attacks and other disruptive problems which could result in the theft, destruction or misappropriation of confidential information.

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We may need to spend significant capital or other resources to ensure effective ongoing protection against the threat of security breaches or to alleviate problems caused by security concerns. Despite our precautions, a security breach or computer virus could occur which could have a significant negative impact on our business including damage to our reputation, the loss of customers and potential customers and material financial liability to us. Any such event would likely have a material adverse impact on our business, operating results and financial condition.

An increasing number of large and more complex customer contracts, or contracts that involve the delivery of services over contractually committed periods, generally delays the timing of our revenue recognition and, in the short-term, may adversely affect our operating results, financial condition and the market price of our stock

Due to an increasing number of large and more complex customer contracts, particularly in our Banking Solutions segment, we have experienced, and will likely continue to experience, delays in the timing of our revenue recognition. These arrangements generally require significant implementation work, product customization and modification, systems integration and user acceptance testing. This results in the recognition of revenue over the period of project completion which normally spans several quarters. Delays in revenue recognition on these contracts, including delays that result from customer decisions to halt or slow down a long-term project due to their own staffing or other challenges, could adversely affect our operating results, financial condition and the market price of our common stock. Additionally, large bank and financial institution customer opportunities are very competitive and take significant time and effort to consummate. When competing for these customer opportunities, we face greater sales costs, longer sales cycles and less predictability with respect to these orders than with orders in other areas of our business. If we are unable to continue to generate new large orders on a regular basis, our business operating results and financial condition could be adversely affected.

Acquisitions could disrupt our business and harm our financial condition

Part of our operating strategy is to identify and pursue strategic acquisitions that can expand our geographical footprint or complement our existing product functionality. In February 2013, we acquired Prilos AG, a long-time reseller of our document automation products in the German marketplace. In October 2012, we acquired the assets of 5280 Dynamic Solutions LLC, a US-based software company. In September 2012, we acquired Albany Software, Ltd., a UK-based software company. In March 2012 we acquired substantially all of the assets and related operations of Intuit’s commercial banking business. In November 2011, we acquired IDT, Ltd., with operations in the UK. We may in the future acquire or make investments in other businesses, products or technologies. Any acquisition or strategic investment we have made or may make in the future may entail numerous risks, including the following:

• difficulties integrating acquired operations, personnel, technologies or products;

• inability to retain key personnel of the acquired company;

• inadequacy of existing operating, financial and management information systems to support the combined organization or new operations;

• write-offs related to impairment of goodwill and other acquired assets;

• entrance into markets in which we have no or limited prior experience or knowledge;

• diversion of management’s focus from our core business concerns;

• dilution to existing stockholders and our earnings per share;

• incurrence of substantial debt;

• exposure to litigation from third parties, including claims related to intellectual property or other assets acquired or liabilities assumed; and

• failure to realize anticipated benefits of the transaction due to the above factors or other factors.

Any such difficulties encountered as a result of any merger, acquisition or strategic investment could have a material adverse effect on our business, operating results and financial condition.

As a result of our acquisitions, we could be subject to significant future write-offs with respect to intangible assets, which may adversely affect our future operating results

We review our intangible assets periodically for impairment. At March 31, 2013, the carrying value of our goodwill and our other intangible assets was approximately $109 million and $88 million, respectively. While we reviewed our goodwill and our other intangible assets during the fourth quarter of fiscal year 2012 and concluded that there was no impairment, we could be subject to future impairment charges with respect to these intangible assets or intangible assets arising as a result of acquisitions in future periods. Any such charges, to the extent occurring, would likely have a material adverse effect on our operating results.

Our fixed costs may lead to operating results below analyst or investor expectations if our revenues are below anticipated levels, which could adversely affect the market price of our common stock

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A significant percentage of our expenses, particularly personnel and facilities costs, are relatively fixed and based in part on anticipated revenue levels, which can be difficult to predict. A decline in revenues without a corresponding and timely slowdown in expense growth could negatively affect our business. Significant revenue shortfalls in any quarter may cause significant declines in operating results since we may be unable to reduce spending in a timely manner.

Quarterly or annual operating results that are below the expectations of public market analysts could adversely affect the market price of our common stock. Factors that could cause fluctuations in our operating results include the following:

• economic conditions, which may affect our customers’ and potential customers’ budgets for information technology expenditures;

• the timing of orders and longer sales cycles;

• the timing of product implementations, which are highly dependent on customers’ resources and discretion;

• the incurrence of costs relating to the integration of software products and operations in connection with acquisitions of technologies or businesses; and

• the timing and market acceptance of new products or product enhancements by either us or our competitors.

Because of these factors, we believe that period-to-period comparisons of our results of operations are not necessarily meaningful.

Our mix of products and services could have a significant effect on our financial condition, results of operations and the market price of our common stock

The gross margins for our products and services vary considerably. Our software revenues generally yield significantly higher gross margins than do our subscriptions and transactions, service and maintenance and equipment and supplies revenue streams. If software license revenues or recurring revenues were to significantly decline in any future period, or if the mix of our products and services in any given period did not match our expectations, our results of operations and the market price of our common stock could be significantly adversely affected.

We face risks associated with our international operations that could harm our financial condition and results of operations

A significant percentage of our revenues have been generated by our international operations and our future growth rates and success are in part dependent on our continued growth and success in international markets. We have operations in the US, Canada, UK, Australia, New Zealand, France and Germany. As is the case with most international operations, the success and profitability of these operations are subject to numerous risks and uncertainties that include, in addition to the risks our business as a whole faces, the following:

• currency exchange rate fluctuations;

• difficulties and costs of staffing and managing foreign operations;

• differing regulatory and industry standards and certification requirements;

• the complexities of tax laws in foreign jurisdictions;

• reduced protection for intellectual property rights in some countries; and

• import or export licensing requirements.

Our business and operating results are subject to fluctuations in foreign currency exchange rates

We conduct a substantial portion of our operations outside of the US, principally in the United Kingdom, continental Europe and the Asia-Pacific region. During the nine months ended March 31, 2013, approximately 37% of our revenues and 29% of our operating expenses were attributable to customers or operations located outside of North America. During the nine months ended March 31, 2013 as compared to the same period in the prior year, the foreign currency exchange rates of the British Pound Sterling to the US Dollar decreased slightly. We anticipate that foreign currency exchange rates may continue to fluctuate in the near term. Appreciation of the US Dollar against the British Pound Sterling, European Euro or Australian Dollar will have the impact of reducing both our revenues and operating expenses.

A significant percentage of our revenues to date have come from our payment and document management offerings and our future performance will depend on continued market acceptance of these solutions

A significant percentage of our revenues to date have come from the license and maintenance of our payment and document management offerings and sales of associated products and services. Any significant reduction in demand for our payment and document management offerings could have a material adverse effect on our business, operating results and financial condition. Our future performance could depend on the following factors:

• retaining and expanding our software maintenance and subscriptions and transactions customer bases, which are significant sources of our recurring revenue;

35

• continued market acceptance of our payment and document management offerings;

• our ability to demonstrate the value of our solutions as compared to solutions from other vendors such as enterprise resource planning software vendors that offer a broader enterprise application solution;

• our ability to introduce enhancements to meet the market’s evolving needs for secure payments and cash management solutions; and

• acceptance of our solutions that are offered on a SaaS basis.

Because we recognize subscription revenue from our customers over the term of their agreements, downturns or upturns in sales of our subscription based offerings will not be immediately reflected in our operating results

We recognize subscription revenue over the term of our customer agreements. As a result, most of our quarterly subscription revenue results from agreements entered into during previous quarters. Consequently, a shortfall in orders for our subscription based solutions in any quarter may not significantly reduce our subscription revenue for that quarter, but could negatively affect revenue in future quarters. In addition, we may be unable to quickly reduce our cost structure in response to a decrease in these orders. Accordingly, the effect of downturns in sales of our subscription based solutions will not be fully reflected in our results of operations until future periods. A subscription revenue model also makes it difficult for us to rapidly increase our revenue through additional subscription sales in any one period, as revenue is generally recognized over the applicable customer term.

We face significant competition in our targeted markets, including competition from companies with significantly greater resources, which may result in price reductions and decreased demand for our products

The markets in which we compete are intensely competitive and characterized by rapid technological change. We compete with a wide range of companies ranging from small start-up enterprises with limited resources which compete principally on the basis of technology features or specific customer relationships, to large companies which can leverage significant customer bases and financial resources. Some competitors in our targeted markets have longer operating histories, significantly greater financial, technical, and sales and marketing resources, greater brand recognition and a larger installed customer base than we do. We expect to face additional competition as other established and emerging companies enter the markets we address. In addition, current and potential competitors may make strategic acquisitions or establish cooperative relationships to expand their product offerings and to offer more comprehensive solutions. This growing competition may result in price reductions of our products and services, reduced revenues and gross margins and loss of market share, any one of which could have a material adverse effect on our business, operating results and financial condition.

We depend on employees who are skilled in payment, cash and document management and invoice presentment methodologies, business banking solutions and Web and other technologies

Our success depends upon the efforts and abilities of our executive officers and technical and sales employees who are skilled in e-commerce, payment methodology and regulation, business banking technologies, and Web, database and network technologies. Our current key employees and potential employees whom we seek to hire in order to support our growth are in high demand within the marketplace and many competitors, customers and industry organizations are able to offer considerably higher compensation packages than we currently provide. The loss of one or more of our key employees or our failure to attract and retain sufficient qualified employees to grow our operations could have a material adverse effect on our business. In addition, we do not maintain key man life insurance policies on any of our employees and our employees are generally free to terminate their employment with us at any time. The loss of the services of any of our executive officers or other key employees could have a material adverse effect on our business, operating results and financial condition.

Our success depends on our ability to develop new and enhanced products, services and strategic partner relationships

The markets in which we compete are subject to rapid technological change and our success is dependent on our ability to develop new and enhanced products, services and strategic partner relationships that meet evolving market needs. Trends that could have a critical impact on us include:

• evolving industry standards, mandates and laws, such as those mandated by the National Automated Clearing House Association and the Association for Payment Clearing Services;

• rapidly changing technology, which could cause our software to become suddenly outdated or could require us to make our products compatible with new database or network systems;

• developments and changes relating to the Web, cloud computing and mobile applications that we must address as we maintain existing products and introduce new products; and

• the loss of any of our key strategic partners who serve as a valuable network from which we can leverage industry expertise and respond to changing marketplace demands.

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There can be no assurance that technological advances will not cause our products to become obsolete or uneconomical. If we are unable to develop and introduce new products or enhancements to existing products in a timely and successful manner, our business, operating results and financial condition could be materially adversely affected. Similarly, if our new products do not receive general marketplace acceptance, or if the sales cycle of any of our new products significantly delays the timing of revenue recognition, our results could be negatively affected.

We rely on certain third-party software and data center hosting facilities, which could cause errors, interruptions or failures to our solutions or be difficult to replace

We rely on software licensed from third parties in order to deliver certain of our solutions. This software may not continue to be available to us on commercially reasonable terms, or at all. The loss of the right to use any of this software could result in delays in our ability to provide our solutions until equivalent technology is either developed by us or acquired from another third party, if available, which may not be possible on a cost effective basis. In addition, errors or defects in third-party software that is used in conjunction with our solutions could adversely affect the operation of our products.

Our SaaS offerings provide services to our customers from data center facilities in several different US and international locations. Some of these data centers are operated by third parties, and we have limited control over those facilities. We evaluate and select our data center providers carefully, and we have developed certain disaster recovery plans and maintain backup systems to reduce the risk and adverse effects of any disruption or failure at these data centers. However, such an event could occur despite our precautions and cause system interruptions, reputational harm, delays in product development, breaches of data security, failure to maintain service level requirements and the loss of critical data, any of which could adversely affect our business, financial condition and results of operations.

Our business could be subject to future legal or regulatory actions, which could have a material adverse effect on our operating results

Our software products and SaaS offerings facilitate the transmission of business documents and information including, in some cases, confidential data related to payments, invoices and cash management. Our Web-based software products and certain of our SaaS offerings transmit this data electronically, and we are therefore subject to laws, regulations and industry standards regarding security, data protection and electronic commerce. While we believe that we are in compliance with applicable current regulatory requirements, there can be no assurance that future legal or regulatory actions will not impact us. To the extent that current or future regulatory or legal developments mandate a change in any of our products or services, require us to comply with any industry specific licensing or compliance requirements, alter the demand for or the competitive environment of our products and services or require us to make material changes to our internal operating, financial or management information systems, we might not be able to respond to such requirements in a timely or cost effective manner. If this were to occur, our business, operating results and financial condition could be materially adversely affected.

Defects or disruptions in our products or services could diminish demand for our solutions and have a material adverse effect on our future financial results

If the products that we offer and introduce do not sustain marketplace acceptance, our future financial results could be adversely affected. Any unanticipated performance problems, defects or bugs could result in additional development costs, diversion of technical and other resources from our other development efforts, service disruptions for our SaaS offerings, negative publicity regarding us and our products, harm to our customer relationships and exposure to potential liability claims.

Catastrophic events may disrupt our business

We are a highly automated business and we rely on our network infrastructure, various software applications and many internal technology systems and data networks for our customer support, development, sales and marketing and accounting and finance functions. Further, our SaaS offerings provide services to our customers from data center facilities in several different US and international locations. Some of these data centers are operated by third parties, and we have limited control over those facilities. A disruption or failure of these systems or data centers in the event of a natural disaster, telecommunications failure, power outage, cyber-attack, war, terrorist attack, or other catastrophic event could cause system interruptions, reputational harm, delays in product development, breaches of data security and loss of critical data. Such an event could also prevent us from fulfilling customer orders or maintaining certain service level requirements, particularly in respect of our SaaS and hosted offerings. While we have developed certain disaster recovery plans and maintain backup systems to reduce the potentially adverse effect of such events, a catastrophic event that resulted in the destruction or disruption of any of our data centers or our critical business or information technology systems could severely affect our ability to conduct normal business operations and, as a result, our business, operating results and financial condition could be adversely affected.

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We could incur substantial costs resulting from warranty claims or product liability claims

Our product agreements typically contain provisions that afford customers a degree of warranty protection in the event that our products fail to conform to written specifications. These agreements normally contain provisions intended to limit the nature and extent of our risk of warranty and product liability claims. A court, however, might interpret these terms in a limited way or conclude that part or all of these terms are unenforceable. Furthermore, some of our agreements are governed by non-US law and there is a risk that foreign law might provide us less or different protection. While we maintain general liability insurance, including coverage for errors and omissions, we cannot be sure that our existing coverage will continue to be available on reasonable terms or will be available in amounts sufficient to cover one or more large claims.

Our products are used to facilitate the transmission of sensitive business documents and other confidential data related to payments, cash management and invoices. Further, some of our products facilitate the actual transfer of cash or transmit instructions that initiate cash transfer. Although we have not experienced any material warranty or product liability claims to date, a warranty or product liability claim, whether or not meritorious, could result in substantial costs and a diversion of management’s attention and our resources, which could have an adverse effect on our business, operating results and financial condition.

We could be adversely affected if we are unable to protect our proprietary technology and could be subject to litigation regarding intellectual property rights, which could cause serious harm to our business

We rely upon a combination of patent, copyright and trademark laws and non-disclosure and other intellectual property contractual arrangements to protect our proprietary rights. However, we cannot assure that our patents, pending applications for patents that may issue in the future, or other intellectual property will be of sufficient scope and strength to provide meaningful protection to our technology or any commercial advantage to us, or that the patents will not be challenged, invalidated or circumvented. We enter into agreements with our employees and customers that seek to limit and protect the distribution of proprietary information. Despite our efforts to safeguard and maintain our proprietary rights, there can be no assurance that such rights will remain protected or that we will be able to detect unauthorized use and take appropriate steps to enforce our intellectual property rights.

Litigation involving patents and other intellectual property rights is common in the United States and in other countries where we operate. We may be a party to litigation in the future to protect our intellectual property rights or as a result of an alleged infringement of the intellectual property rights of others. Any such claims, whether or not meritorious, could require us to spend significant sums in litigation, pay damages, delay product implementations, develop non-infringing intellectual property or acquire licenses to intellectual property that is the subject of the infringement claim. In addition, under many of our customer contracts, we are required to indemnify our customers for third-party intellectual property infringement claims, which would increase the costs to us of any such claims. These claims could have a material adverse effect on our business, operating results and financial condition.

We engage off-shore development resources which may not be successful and which may put our intellectual property at risk

In order to optimize our research and development capabilities and to meet development timeframes, we contract with off-shore third-party vendors in India and elsewhere for certain development activities. While our experience to date with these resources has been positive, there are a number of risks associated with off-shore development activities that include, but are not limited to, the following:

• less efficient and less accurate communication and information flow as a consequence of time, distance and language barriers between our primary development organization and the off-shore resources, resulting in delays or deficiencies in development efforts;

• disruption due to political or military conflicts around the world;

• misappropriation of intellectual property from departing personnel, which we may not readily detect; and

• currency exchange rate fluctuations that could adversely impact the cost advantages intended from these agreements.

To the extent that these or unforeseen risks occur, our operating results and financial condition could be adversely impacted.

Certain anti-takeover provisions contained in our charter and under Delaware law could hinder a takeover attempt

We are subject to the provisions of Section 203 of the General Corporation Law of the State of Delaware prohibiting, under some circumstances, publicly-held Delaware corporations from engaging in business combinations with some stockholders for a specified period of time without the approval of the holders of substantially all of our outstanding voting stock. Such provisions could delay or impede the removal of incumbent directors and could make more difficult a merger, tender offer or proxy contest involving us, even if such events could be beneficial, in the short term, to the interests of our stockholders. In addition, such provisions could limit the price that some investors might be willing to pay in the future for shares of our common stock. Our certificate of

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incorporation and bylaws contain provisions relating to the limitation of liability and indemnification of our directors and officers, dividing our board of directors into three classes of directors serving three-year terms and providing that our stockholders can take action only at a duly called annual or special meeting of stockholders.

Risk Factors Related to our Convertible Notes

In December 2012, we issued, at par value, $189.8 million aggregate principal amount of 1.50% convertible senior notes due in December 2017. In connection with the pricing of the notes, we purchased convertible note hedge transactions with a strike price equal to the initial conversion price of the notes and we sold warrants with a strike price of $40.04 per share with certain counterparties. The note hedges and the warrants each cover approximately 6.3 million shares of our common stock.

Servicing the notes will require a significant amount of cash, and we may not have sufficient cash flow from our business to pay our obligations under the notes

Our ability to make scheduled payments of interest and, upon maturity or early conversion, the principal balance of the notes, depends on our future performance which is subject to economic, financial, competitive and other factors beyond our control. Our business may not continue to generate cash flow from operations in the future sufficient to service our debt. If we are unable to generate such cash flow, we may be required to adopt one or more alternatives, such as selling assets, restructuring debt or obtaining additional debt or equity financing on terms that may not be favorable to us or available to us at all. Our ability to refinance the notes will depend on the capital markets and our financial condition at that time. We may not be able to engage in any of these activities or engage in these activities on desirable terms, which could result in a default on our debt obligations or future indebtedness.

The conditional conversion feature of the notes, if triggered, and the requirement to repurchase the notes upon a fundamental change may adversely affect our financial condition and operating results

In the event the conditional conversion feature of the notes is triggered, holders of notes will be entitled to convert the notes at any time during specified periods at their option. If one or more holders elect to convert their notes, we would be required to settle the principal portion of the notes in cash. If we undergo a fundamental change, (as described in the Indenture), subject to certain conditions, holders of the notes may require us to repurchase for cash all or part of their notes at a price equal to 100% of the principal amount of the notes, plus accrued and unpaid interest. Either of these events could adversely affect our liquidity. Even if holders do not elect to convert their notes, we could be required under applicable accounting rules to reclassify all or a portion of the outstanding principal balance of the notes to a current rather than long-term liability, which would result in a material reduction of our working capital.

The accounting for the notes will result in our having to recognize interest expense significantly more than the stated interest rate of the notes and may result in volatility to our consolidated statement of operations

On January 17, 2013, we held a special meeting of our stockholders for the purpose of amending our certificate of incorporation to increase the number of authorized shares of our common stock from 50 million shares to 100 million shares. We obtained stockholder approval for this proposal and amended our certificate of incorporation accordingly on January 17, 2013. Prior to January 17, 2013 we were required to settle any conversions of the notes entirely in cash. As such, for periods prior to January 17, 2013, we accounted for the notes conversion feature as a derivative instrument and recorded changes in fair value of that instrument through earnings.

Upon issuance of the notes we were required to establish a separate initial value for the conversion option and to bifurcate this value from the value attributable to the balance of the notes, or the debt component. As a result, for accounting purposes, we were required to treat the notes as having been issued with a discount to their face principal amount, which is referred to as an original issue discount. We are accreting the original issue discount to interest expense ratably over the term of the notes, which results in an effective interest rate in our consolidated statement of operations that is in excess of the stated coupon rate of the notes. This will reduce our earnings and could adversely affect the price at which our common stock trades, but will have no effect on the amount of cash interest paid to holders or on our cash flows.

Prior to January 17, 2013, the convertible note hedge transactions were also accounted for as derivatives with changes in fair value reflected in earnings.

As a result of the approval to increase the number of authorized shares of our common stock, both the derivative liability and derivative asset related to the conversion option and the convertible note hedge transactions were reclassified to equity as of January 17, 2013, at which point we were no longer subject to earnings volatility based on changes in the fair value of these instruments. However, if we do not continue to satisfy all of the criteria required for equity classification, the conversion option and the convertible note hedge transactions would be reclassified out of equity and be subject to re-measurement as a derivative instrument. Changes in fair value resulting from any such re-measurement would be reflected in earnings.

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We may be subject to significant future write-offs with respect to intangible assets or deferred tax assets

Certain of our assets, such as intangible assets and deferred tax assets, are subject to periodic tests of recoverability based on a variety of factors. Those factors typically include, at a minimum, projections of future income levels and cash flows. The accounting for the notes will result in our recognition of a significant level of interest expense, particularly non-cash interest expense, as the carrying value of debt is accreted to par and as we amortize our debt issue costs, including the underwriters’ discount. If our cash flows or income levels were to meaningfully decline, we could be subject to impairment charges with respect to these assets which would have a material adverse effect on our consolidated statement of operations.

The convertible note hedge and warrant transactions may affect the value of the notes and our common stock

The warrant transactions could have a dilutive effect on our earnings per share to the extent that the market price per share of our common stock exceeds the applicable strike price of the warrants. However, subject to certain conditions, we may elect to settle the warrants in cash.

From time to time, the counterparties to the convertible note hedge transactions or their affiliates may modify their respective hedge positions by entering into or unwinding various derivatives with respect to our common stock and/or purchasing or selling our common stock or other securities of ours in secondary market transactions (and are likely to do so during any observation period related to a conversion of notes). This activity could cause or avoid an increase or a decrease in the market price of our common stock or the notes.

Our level of indebtedness may limit our financial flexibility

At March 31, 2013 we had total consolidated indebtedness of approximately $189.8 million and unrestricted cash of $284.0 million. Our level of indebtedness affects our operations in several ways, including the following:

• a portion of our cash flows from operating activities must be used to service our indebtedness and is not available for other purposes;

• we may be at a competitive disadvantage as compared to similar companies that have less debt; and

• additional financing in the future for working capital, capital expenditures, acquisitions, general corporate or other purposes may have higher costs and contain restrictive covenants, or may not be available to us.

The factors that will affect our ability to obtain additional financing may be beyond our control and include financial market conditions, the value of our assets and our performance at the time we need financing.

Item 2. Unregistered Sales of Equity Securities and Use of Proceeds

The following table provides information about purchases by us of our common stock during the three months ended March 31, 2013:

Period	Total Number of Shares Purchased		Average Price Paid Per Share		Total Number of Shares Purchased as Part of Publicly Announced Plans or Programs		Approximate Dollar Value of Shares That May Yet be Purchased Under The Plans or Programs (1)
January 1, 2013 — January 31, 2013		—		—		—	$	16,562,000
February 1, 2013 — February 28, 2013		—		—		—	$	16,562,000
March 1, 2013 — March 31, 2013		—		—		—	$	16,562,000
Total		—		—		—	$	16,562,000

⁽¹⁾ In May 2012, our board of directors authorized a repurchase program for up to $20.0 million of our common stock. This repurchase program replaces the program that had been in place since April 2008.

Item 6. Exhibits

See the Exhibit Index for a list of exhibits filed as part of this Quarterly Report on Form 10-Q, which Exhibit Index is incorporated herein by reference.

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SIGNATURE

Pursuant to the requirements of the Securities Exchange Act of 1934, the registrant has duly caused this report to be signed on its behalf by the undersigned thereunto duly authorized.

	Bottomline Technologies (de), Inc.
Date: May 8, 2013	By:	/s/    KEVIN M. DONOVAN
		Kevin M. Donovan
		Chief Financial Officer and Treasurer
		(Principal Financial and Accounting Officer)

41

EXHIBIT INDEX

Exhibit Number	Description
31.1	Rule 13a-14(a)/15d-14(a) Certification of Principal Executive Officer
31.2	Rule 13a-14(a)/15d-14(a) Certification of Principal Financial Officer
32.1	Section 1350 Certification of Principal Executive Officer
32.2	Section 1350 Certification of Principal Financial Officer
101.INS**	XBRL Instance Document
101.SCH**	XBRL Taxonomy Extension Schema Document
101.CAL**	XBRL Taxonomy Calculation Linkbase Document
101.DEF**	XBRL Taxonomy Definition Linkbase Document
101.LAB**	XBRL Taxonomy Label Linkbase Document
101.PRE**	XBRL Taxonomy Presentation Linkbase Document

** submitted electronically herewith

Attached as Exhibit 101 to this report are the following formatted in XBRL (Extensible Business Reporting Language): (i) Condensed Consolidated Balance Sheets as of March 31, 2013 (unaudited) and June 30, 2012, (ii) Unaudited Condensed Consolidated Statements of Comprehensive Income (Loss) for the three and nine months ended March 31, 2013 and 2012, (iii) Unaudited Condensed Consolidated Statements of Cash Flows for the nine months ended March 31, 2013 and 2012 and (iv) Notes to Unaudited Condensed Consolidated Financial Statements.

In accordance with Rule 406T of Regulation S-T, the XBRL-related information in Exhibit 101 to this Quarterly Report on Form 10-Q is deemed not filed or part of a registration statement or prospectus for purposes of sections 11 or 12 of the Securities Act, is deemed not filed for purposes of section 18 of the Exchange Act, and otherwise is not subject to liability under these sections.

42

EX-31.1

Exhibit 31.1

CERTIFICATIONS

I, Robert A. Eberle, certify that:

1. I have reviewed this Quarterly Report on Form 10-Q of Bottomline Technologies (de), Inc.;

2. Based on my knowledge, this report does not contain any untrue statement of a material fact or omit to state a material fact necessary to make the statements made, in light of the circumstances under which such statements were made, not misleading with respect to the period covered by this report;

3. Based on my knowledge, the financial statements, and other financial information included in this report, fairly present in all material respects the financial condition, results of operations and cash flows of the registrant as of, and for, the periods presented in this report;

4. The registrant’s other certifying officer and I are responsible for establishing and maintaining disclosure controls and procedures (as defined in Exchange Act Rules 13a-15(e) and 15d-15(e)) and internal control over financial reporting (as defined in Exchange Act Rules 13a-15(f) and 15d-15(f)) for the registrant and have:

a) Designed such disclosure controls and procedures, or caused such disclosure controls and procedures to be designed under our supervision, to ensure that material information relating to the registrant, including its consolidated subsidiaries, is made known to us by others within those entities, particularly during the period in which this report is being prepared;

b) Designed such internal control over financial reporting, or caused such internal control over financial reporting to be designed under our supervision, to provide reasonable assurance regarding the reliability of financial reporting and the preparation of financial statements for external purposes in accordance with generally accepted accounting principles;

c) Evaluated the effectiveness of the registrant’s disclosure controls and procedures and presented in this report our conclusions about the effectiveness of the disclosure controls and procedures, as of the end of the period covered by this report based on such evaluation; and

d) Disclosed in this report any change in the registrant’s internal control over financial reporting that occurred during the registrant’s most recent fiscal quarter (the registrant’s fourth fiscal quarter in the case of an annual report) that has materially affected, or is reasonably likely to materially affect, the registrant’s internal control over financial reporting; and

5. The registrant’s other certifying officer and I have disclosed, based on our most recent evaluation of internal control over financial reporting, to the registrant’s auditors and the audit committee of the registrant’s board of directors (or persons performing the equivalent functions):

a) All significant deficiencies and material weaknesses in the design or operation of internal control over financial reporting which are reasonably likely to adversely affect the registrant’s ability to record, process, summarize and report financial information; and

b) Any fraud, whether or not material, that involves management or other employees who have a significant role in the registrant’s internal control over financial reporting.

Date: May 8, 2013

By:	/s/    ROBERT A. EBERLE
	Robert A. Eberle
	Chief Executive Officer
	(Principal Executive Officer)

EX-31.2

Exhibit 31.2

CERTIFICATIONS

I, Kevin M. Donovan, certify that:

1. I have reviewed this Quarterly Report on Form 10-Q of Bottomline Technologies (de), Inc.;

2. Based on my knowledge, this report does not contain any untrue statement of a material fact or omit to state a material fact necessary to make the statements made, in light of the circumstances under which such statements were made, not misleading with respect to the period covered by this report;

3. Based on my knowledge, the financial statements, and other financial information included in this report, fairly present in all material respects the financial condition, results of operations and cash flows of the registrant as of, and for, the periods presented in this report;

4. The registrant’s other certifying officer and I are responsible for establishing and maintaining disclosure controls and procedures (as defined in Exchange Act Rules 13a-15(e) and 15d-15(e)) and internal control over financial reporting (as defined in Exchange Act Rules 13a-15(f) and 15d-15(f)) for the registrant and have:

a) Designed such disclosure controls and procedures, or caused such disclosure controls and procedures to be designed under our supervision, to ensure that material information relating to the registrant, including its consolidated subsidiaries, is made known to us by others within those entities, particularly during the period in which this report is being prepared;

b) Designed such internal control over financial reporting, or caused such internal control over financial reporting to be designed under our supervision, to provide reasonable assurance regarding the reliability of financial reporting and the preparation of financial statements for external purposes in accordance with generally accepted accounting principles;

c) Evaluated the effectiveness of the registrant’s disclosure controls and procedures and presented in this report our conclusions about the effectiveness of the disclosure controls and procedures, as of the end of the period covered by this report based on such evaluation; and

d) Disclosed in this report any change in the registrant’s internal control over financial reporting that occurred during the registrant’s most recent fiscal quarter (the registrant’s fourth fiscal quarter in the case of an annual report) that has materially affected, or is reasonably likely to materially affect, the registrant’s internal control over financial reporting; and

5. The registrant’s other certifying officer and I have disclosed, based on our most recent evaluation of internal control over financial reporting, to the registrant’s auditors and the audit committee of the registrant’s board of directors (or persons performing the equivalent functions):

a) All significant deficiencies and material weaknesses in the design or operation of internal control over financial reporting which are reasonably likely to adversely affect the registrant’s ability to record, process, summarize and report financial information; and

b) Any fraud, whether or not material, that involves management or other employees who have a significant role in the registrant’s internal control over financial reporting.

Date: May 8, 2013

By:	/s/    KEVIN M. DONOVAN
	Kevin M. Donovan
	Chief Financial Officer and Treasurer
	(Principal Financial and Accounting Officer)

EX-32.1

Exhibit 32.1

CERTIFICATION PURSUANT TO

18 U.S.C. SECTION 1350,

AS ADOPTED PURSUANT TO

SECTION 906 OF THE SARBANES-OXLEY ACT OF 2002

In connection with the quarterly report on Form 10-Q of Bottomline Technologies (de), Inc. (the “Company”) for the period ended March 31, 2013 as filed with the Securities and Exchange Commission on the date hereof (the “Report”), the undersigned, Robert A. Eberle, Chief Executive Officer of the Company, hereby certifies, pursuant to 18 U.S.C. Section 1350, that:

(1) the Report fully complies with the requirements of Section 13(a) or 15(d) of the Securities Exchange Act of 1934; and

(2) the information contained in the Report fairly presents, in all material respects, the financial condition and results of operations of the Company.

Date: May 8, 2013

By:	/s/    ROBERT A. EBERLE
	Robert A. Eberle
	Chief Executive Officer
	(Principal Executive Officer)

EX-32.2

Exhibit 32.2

CERTIFICATION PURSUANT TO

18 U.S.C. SECTION 1350,

AS ADOPTED PURSUANT TO

SECTION 906 OF THE SARBANES-OXLEY ACT OF 2002

In connection with the quarterly report on Form 10-Q of Bottomline Technologies (de), Inc. (the “Company”) for the period ended March 31, 2013 as filed with the Securities and Exchange Commission on the date hereof (the “Report”), the undersigned, Kevin M. Donovan, Chief Financial Officer and Treasurer of the Company, hereby certifies, pursuant to 18 U.S.C. Section 1350, that:

(1) the Report fully complies with the requirements of Section 13(a) or 15(d) of the Securities Exchange Act of 1934; and

(2) the information contained in the Report fairly presents, in all material respects, the financial condition and results of operations of the Company.

Date: May 8, 2013

By:	/s/    KEVIN M. DONOVAN
	Kevin M. Donovan
	Chief Financial Officer and Treasurer
	(Principal Financial and Accounting Officer)

XML

Goodwill and Other Intangible Assets - Schedule of Intangible Assets Subject to Amortization and Intangible Assets Not Subject to Amortization (Detail) (USD $) In Thousands, unless otherwise specified	9 Months Ended	12 Months Ended
	Mar. 31, 2013	Jun. 30, 2012
Finite-Lived Intangible Assets [Line Items]
Goodwill	$ 109,055	$ 98,974
Total intangible assets	196,809	177,941
Gross Carrying Amount	193,952	171,494
Accumulated Amortization	(106,198)	(92,527)
Net Carrying Value	87,754	78,967
Customer related [Member]
Finite-Lived Intangible Assets [Line Items]
Gross Carrying Amount	131,386	111,159
Accumulated Amortization	(67,016)	(58,653)
Net Carrying Value	64,370	52,506
Weighted Average Remaining Life	11 years 2 months 12 days	10 years 8 months 12 days
Core technology [Member]
Finite-Lived Intangible Assets [Line Items]
Gross Carrying Amount	50,632	48,534
Accumulated Amortization	(34,523)	(31,179)
Net Carrying Value	16,109	17,355
Weighted Average Remaining Life	6 years 10 months 24 days	7 years 6 months
Other intangible assets [Member]
Finite-Lived Intangible Assets [Line Items]
Gross Carrying Amount	11,934	11,801
Accumulated Amortization	(4,659)	(2,695)
Net Carrying Value	$ 7,275	$ 9,106
Weighted Average Remaining Life	5 years 4 months 24 days	5 years 10 months 24 days

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Convertible Senior Notes - Total Interest Expense Related to Convertible Notes (Detail) (USD $) In Thousands, unless otherwise specified	3 Months Ended		9 Months Ended
	Mar. 31, 2013	Mar. 31, 2012	Mar. 31, 2013	Mar. 31, 2012
Debt Disclosure [Abstract]
Contractual interest expense (cash)	$ 712		$ 862
Amortization of debt issue costs (non-cash)	297		358
Amortization of debt discount (non-cash)	2,399		2,884
Total interest expense	$ 3,408		$ 4,104
Effective interest rate of the liability component	7.18%		7.17%

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Operations by Segments and Geographic Areas - Schedule of Segment Reporting Information (Detail) (USD $) In Thousands, unless otherwise specified	3 Months Ended		9 Months Ended
	Mar. 31, 2013	Mar. 31, 2012	Mar. 31, 2013	Mar. 31, 2012
Segment revenue:
Segment revenue	$ 64,444	$ 55,316	$ 189,742	$ 162,886
Segment measure of profit:
Total measure of segment profit	10,772	8,553	31,650	30,833
Payments and Transactional Documents [Member]
Segment revenue:
Segment revenue	29,642	25,254	84,050	75,063
Segment measure of profit:
Total measure of segment profit	7,906	5,415	21,274	17,574
Banking Solutions [Member]
Segment revenue:
Segment revenue	17,051	14,051	52,025	40,438
Segment measure of profit:
Total measure of segment profit	1,336	1,485	4,170	6,371
Outsourced Solutions [Member]
Segment revenue:
Segment revenue	17,751	16,011	53,667	47,385
Segment measure of profit:
Total measure of segment profit	$ 1,530	$ 1,653	$ 6,206	$ 6,888

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Derivative Instruments (Tables)

9 Months Ended

Mar. 31, 2013

Derivative Instruments And Hedging Activities Disclosure [Abstract]

Summary of Loss on Changes in Fair Value and Provides a Rollforward of Activity from Inception

The gain (loss) as a result of changes in the fair value of our derivative instruments for the three and nine months ended March 31, 2013 is as follows:

	Fair Value at December 31, 2012		Fair Value upon reclassification to equity			Fair Value at March 31, 2013		Gain/(loss) on derivative instruments for the three months ending March 31, 2013
Note Hedges	$	47,817	$	50,086	1	$	n/a	$	2,269
Conversion Feature		64,009		65,796	1		n/a		(1,787	)
Net gain on derivative instruments								$	482

	Fair Value at Inception		Fair Value upon reclassification to equity			Fair Value at March 31, 2013		Gain/(loss) on derivative instruments for the nine months ending March 31, 2013
Note Hedges	$	42,390	$	50,086	1	$	n/a	$	7,696
Conversion Feature		56,495		65,796	1		n/a		(9,301	)
Warrants		12,950		15,780	2		n/a		(2,830	)
Net loss on derivative instruments								$	(4,435	)

¹  The requirements for stockholders equity classification for the Note Hedges and Conversion Feature were met as of January 17, 2013 and, as of that date, we re-measured the fair value of these instruments and reclassified those amounts to stockholders equity. The fair values and resulting gain or loss are based on re-measurement at January 17, 2013.

² The conditions that gave rise to the potential cash settlement of a portion of the Warrants expired on December 12, 2012 and, as of that date, we re-measured the fair value of these instruments and reclassified that amount to stockholders equity. The fair value and resulting loss is based on re-measurement at December 12, 2012.

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Restructuring Costs - Rollforward of Restructuring Activity (Detail) (USD $) In Thousands, unless otherwise specified	9 Months Ended
	Mar. 31, 2013
Severance Costs [Member]
Restructuring Cost and Reserve [Line Items]
Accrued at June 30, 2012	$ 228
Charged to expense	1,035
Payments charged against the accrual	(1,231)
Accrued at March 31, 2013	32
Facility Exit Costs [Member]
Restructuring Cost and Reserve [Line Items]
Accrued at June 30, 2012
Charged to expense	157
Payments charged against the accrual	(157)
Accrued at March 31, 2013

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Operations by Segments and Geographic Areas - Schedule of Long-Lived Assets, Excluding Deferred Tax Assets and Intangible Assets, Based on Geographic Designation (Detail) (USD $) In Thousands, unless otherwise specified	Mar. 31, 2013	Jun. 30, 2012
Long-lived assets
Long-lived assets	$ 34,946	$ 23,654
United States [Member]
Long-lived assets
Long-lived assets	30,623	19,189
United Kingdom [Member]
Long-lived assets
Long-lived assets	4,202	4,332
Continental Europe [Member]
Long-lived assets
Long-lived assets	28	5
Asia-Pacific [Member]
Long-lived assets
Long-lived assets	$ 93	$ 128

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Derivative Instruments - Summary of Loss Changes in Fair Value and Provides Rollforward of Activity from Inception (Detail) (USD $) In Thousands, unless otherwise specified	3 Months Ended	9 Months Ended
	Mar. 31, 2013	Mar. 31, 2013	Dec. 31, 2012	Dec. 12, 2012
Derivative Financial Instruments [Line Items]
Gain/(loss) on derivative instruments	$ 482	$ (4,435)
Warrants [Member]
Derivative Financial Instruments [Line Items]
Derivative instruments, Fair value, Liability				12,950
Gain/(loss) on derivative instruments		(2,830)
Fair Value upon reclassification to equity	15,780	15,780
Note Hedges [Member]
Derivative Financial Instruments [Line Items]
Derivative instruments, Fair value, Asset			47,817	42,390
Fair Value upon reclassification to equity, Asset	50,086	50,086
Gain/(loss) on derivative instruments	2,269	7,696
Conversion Feature [Member]
Derivative Financial Instruments [Line Items]
Derivative instruments, Fair value, Liability			64,009	56,495
Fair Value upon reclassification to equity, Liability	65,796	65,796
Gain/(loss) on derivative instruments	$ (1,787)	$ (9,301)

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Product and Business Acquisitions

9 Months Ended

Mar. 31, 2013

Business Combinations [Abstract]

Product and Business Acquisitions

Note 4—Product and Business Acquisitions

2013 Acquisition Activity

Prilos AG

On February 13, 2013, we acquired Prilos AG (Prilos), located in Frankfurt, Germany for cash of €0.5 million (approximately $0.7 million based on exchange rates in effect at the acquisition date). Prilos is a long-time reseller of our document automation products in the German marketplace.

At March 31, 2013, we were still finalizing our estimates of fair value for certain intangible assets acquired. Accordingly, the values disclosed for intangible assets and goodwill are subject to change as we finalize our fair value analysis, which we expect to complete during the quarter ending June 30, 2013. In the preliminary allocation of the purchase price we recognized $0.2 million of goodwill, of which $0.1 million is deductible for income tax purposes in the US over a period of fifteen years. The goodwill is not deductible for income tax purposes in Germany.

Prilos’ operating results have been included in our operating results from the date of the acquisition forward as a component of the Payments and Transactional Documents segment and all of the goodwill was allocated to this segment. Identifiable intangible assets of $0.4 million represent customer related assets that are being amortized over a weighted average useful life of seven years.

5280 Dynamic Solutions LLC

On October 25, 2012, we acquired certain assets and assumed certain liabilities of 5280 Dynamic Solutions LLC (5280), a US based software company, in exchange for a cash payment of $1.6 million. The acquisition provides us with new technology with which we intend to expand our product offerings to include SharePoint-based document management solutions for accounts payable automation and other document-centric business needs.

In the allocation of the purchase price we recognized $0.8 million of goodwill which is deductible for US income tax purposes over a period of fifteen years.

5280’s operating results have been included in our operating results from the date of the acquisition forward as a component of the Payments and Transactional Documents segment and all of the goodwill was allocated to this segment. Identifiable intangible assets of $0.7 million include customer related assets and core technology that are being amortized over a weighted average useful life of ten years.

Albany Software Ltd.

On September 11, 2012, we completed the acquisition of Albany Software Ltd. (Albany), a UK based corporation. We acquired, through a UK subsidiary, all of the Albany outstanding share capital from Albany’s stockholders in exchange for a cash payment of £20 million (approximately $32 million based on exchange rates in effect at the acquisition date). Albany is one of the UK’s leading BACS solution providers and their solutions are used by more than 5,000 businesses to streamline, automate and manage processes involving the collection of direct debits and electronic payments.

In the allocation of the purchase price set forth below we recognized $10.7 million of goodwill. The goodwill arose due to the recognition of certain deferred tax liabilities in purchase accounting and the assembled workforce of Albany. The goodwill is not deductible for income tax purposes.

Albany’s operating results have been included in our operating results from the date of the acquisition forward as a component of the Payments and Transactional Documents segment and all of the Albany goodwill was allocated to this segment. Identifiable intangible assets aggregating $23.9 million are being amortized over a weighted average useful life of thirteen years. The identifiable intangible assets include customer related assets, core technology and other intangible assets (a tradename) and are being amortized over weighted average lives of fourteen years, five years and two years, respectively.

The allocation of the purchase price as of March 31, 2013 is as follows:

	(in thousands)
Current assets	$	6,442
Property and equipment		334
Customer related intangible assets		21,786
Core technology		1,920
Other intangible assets		145
Goodwill		10,725
Current liabilities		(3,726	)
Other liabilities		(5,489	)
Total purchase price	$	32,137

For the three and nine months ended March 31, 2013, revenues attributable to the above acquisitions, in the aggregate, represented less than 3% of our consolidated year to date revenues and were integrated into our existing business lines in a manner that makes tracking or reporting earnings specifically attributable to these acquisition impracticable. As the above acquisitions were not material to our financial results, pro forma results of operations have not been presented. Acquisition expenses of approximately $1.0 million were expensed during the nine months ended March 31, 2013, principally as a component of general and administrative expenses in connection with fiscal year 2013 acquisitions.

The valuation of acquired intangible assets for our acquisitions was estimated by performing projections of discounted cash flow, whereby revenues and costs associated with each intangible asset are forecast to derive expected cash flow which is discounted to present value at discount rates commensurate with perceived risk. The valuation and projection process is inherently subjective and relies on significant unobservable inputs (Level 3 inputs). The valuation assumptions also take into consideration our estimates of contract renewal, technology attrition and revenue projections.

Other Investments

In March 2013, we made an investment of $3.0 million in a privately held technology company. This investment is accounted for at cost as we do not have the ability to exercise significant influence over the investee. We will evaluate this investment periodically for indicators of impairment and impairment losses, to the extent occurring, will be recorded as an operating expense.

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Restructuring Costs - Additional Information (Detail) (USD $) In Millions, unless otherwise specified	9 Months Ended
	Mar. 31, 2013
Restructuring And Related Activities [Abstract]
Severance related benefits	$ 0.3

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Product and Business Acquisitions - Allocation of Purchase (Detail) (Albany Software Ltd. [Member], USD $) In Thousands, unless otherwise specified	Mar. 31, 2013	Dec. 31, 2012
Albany Software Ltd. [Member]
Business Acquisition [Line Items]
Current assets	$ 6,442
Property and equipment	334
Customer related intangible assets	21,786
Core technology	1,920
Other intangible assets	145
Goodwill	10,725	10,725
Current liabilities	(3,726)
Other liabilities	(5,489)
Total purchase price	$ 32,137

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Product and Business Acquisitions - Additional Information (Detail)	9 Months Ended				9 Months Ended			9 Months Ended				9 Months Ended
	Mar. 31, 2013 USD ($)	Mar. 31, 2013 5280 Dynamic Solutions LLC [Member] USD ($)	Dec. 31, 2012 5280 Dynamic Solutions LLC [Member] USD ($) Y	Oct. 25, 2012 5280 Dynamic Solutions LLC [Member] USD ($)	Mar. 31, 2013 Prilos AG [Member] USD ($) Y	Feb. 13, 2013 Prilos AG [Member] USD ($)	Feb. 13, 2013 Prilos AG [Member] EUR (€)	Mar. 31, 2013 Albany Software Ltd. [Member] USD ($)	Dec. 31, 2012 Albany Software Ltd. [Member] USD ($)	Sep. 11, 2012 Albany Software Ltd. [Member] USD ($) Customer	Sep. 11, 2012 Albany Software Ltd. [Member] GBP (£)	Mar. 31, 2013 Albany Software Ltd. [Member] Customer related assets [Member]	Mar. 31, 2013 Albany Software Ltd. [Member] Core technology [Member]	Mar. 31, 2013 Albany Software Ltd. [Member] Other intangible assets [Member]
Business Acquisition [Line Items]
Acquisition of business, cash paid				$ 1,600,000		$ 700,000	€ 500,000			$ 32,000,000	£ 20,000,000
Business acquisition, goodwill			800,000		200,000			10,725,000	10,725,000
Goodwill deductible period for income tax purposes, years			15		15
Deduction for income tax purpose					100,000
Business acquisition, identifiable intangible assets		700,000			400,000			23,900,000
Intangible asset amortized estimated useful life		10 years			7 years			13 years				14 years	5 years	2 years
Number of customers using Albany's solutions										5,000	5,000
Revenue from acquisition to total revenue percentage	3.00%
Acquisition expenses								1,000,000
Investment in privately held technology company	$ 3,000,000

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Convertible Senior Notes - Additional Information (Detail) (USD $)	9 Months Ended				9 Months Ended	6 Months Ended	9 Months Ended
	Mar. 31, 2013	Jun. 30, 2012	Jan. 17, 2013 Minimum [Member]	Jan. 17, 2013 Maximum [Member]	Mar. 31, 2013 Warrants [Member]	Dec. 31, 2012 Convertible Senior Notes [Member]	Mar. 31, 2013 Convertible Senior Notes [Member]	Dec. 12, 2012 Convertible Senior Notes [Member]
Debt Instrument [Line Items]
Aggregate principal amount of Convertible Senior Notes	$ 189,750,000							$ 189,800,000
Interest rate on Convertible Senior Notes								1.50%
Maturity date of Convertible Senior Notes							Dec. 01, 2017
Underwriters' exercise in full of over-allotment option							24,800,000
Net proceeds from offering after adjusting for expenses, commissions and discounts							167,300,000
Convertible notes conversion amount in multiples							1,000
Consecutive trading days							30 days
Common stock minimum trading days							20 days
Percentage of common stock conversion price							130.00%
Conditions for conversion of notes							During the five business day period after any five consecutive trading day period (the "measurement period") in which the trading price per $1,000 principal amount of the convertible notes for each trading day of the measurement period was less than 98% of the product of the last reported sales price of our common stock and the conversion rate on each trading day
Last day conversion rate							98.00%
Initial conversion rate per $1,000 principal amount							33.3042
Initial conversion price per share							$ 30.03
Authorized shares	100,000,000	50,000,000	50,000,000	100,000,000
Percentage of repurchase price equal to principal amount of notes to be repurchased							100.00%
Redemption percentage of principal amount of notes outstanding by notice							25.00%
Redemption percentage of principal amount of notes outstanding at request by holders with accrued and unpaid interest							100.00%
Certain events of bankruptcy, insolvency or reorganization, redemption percentage of principal amount of notes outstanding with accrued and unpaid interest							100.00%
Notes Principal amount							1,000
Interest rate per annum							0.25%
Estimated fair value of the contingent interest feature of the notes							0
Convertible Senior Notes, term							5 years
Hedging of common stock						6,300,000
Cost of the Note Hedges							42,300,000
Aggregate proceeds from sale of warrants	25,776,000						25,800,000
Purchase of common stock						6,300,000	6,300,000
Common stock, strike price per share							$ 40.04
Warrants exercisable beginning					Mar. 01, 2018
Warrants exercisable ending					Oct. 18, 2018
Warrant expiration period					150 days
Loss related to a change in fair value						$ 2,800,000

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Net Income Per Share - Schedule of Computation of Basic and Diluted Net Income Per Share (Detail) (USD $) In Thousands, except Per Share data, unless otherwise specified	3 Months Ended		9 Months Ended
	Mar. 31, 2013	Mar. 31, 2012	Mar. 31, 2013	Mar. 31, 2012
Numerator:
Net (loss) income allocable to common stockholders	$ (3,559)	$ (1,332)	$ (10,581)	$ 2,873
Denominator:
Shares used in computing basic net (loss) income per share attributable to common stockholders	35,644	34,460	35,279	34,110
Effect of dilutive securities				1,069
Shares used in computing diluted net (loss) income per share attributable to common stockholders	35,644	34,460	35,279	35,179
Basic net (loss) income per share attributable to common stockholders	$ (0.10)	$ (0.04)	$ (0.30)	$ 0.08
Diluted net (loss) income per share attributable to common stockholders	$ (0.10)	$ (0.04)	$ (0.30)	$ 0.08

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Net Income Per Share - Additional Information (Detail) (USD $)	3 Months Ended	9 Months Ended	3 Months Ended	9 Months Ended
	Mar. 31, 2012	Mar. 31, 2012	Mar. 31, 2013 Stock options and restricted stock [Member]	Mar. 31, 2013 Stock options and restricted stock [Member]	Mar. 31, 2013 Convertible Senior Notes [Member]	Dec. 31, 2012 Convertible Senior Notes [Member]
Net Income Per Share [Line Items]
Shares of restricted stock were excluded from the calculation of diluted earnings per share	3,100,000	0	2,800,000	3,000,000
Number of shares purchased through issue of warrants					6,300,000	6,300,000
Common stock strike price						$ 40.04

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Fair Value

9 Months Ended

Mar. 31, 2013

Fair Value Disclosures [Abstract]

Fair Value

Note 3—Fair Value

Fair Value of Assets and Liabilities

We measure fair value at the price that would be received to sell an asset or paid to transfer a liability in an orderly transaction between market participants at the measurement date. In determining fair value, the assumptions that market participants would use in pricing an asset or liability (the inputs) are based on a tiered fair value hierarchy consisting of three levels, as follows:

Level 1: Observable inputs such as quoted prices for identical assets or liabilities in active markets.

Level 2: Other inputs that are observable directly or indirectly, such as quoted prices for similar instruments in active markets or for similar markets that are not active.

Level 3: Unobservable inputs for which there is little or no market data and which require us to develop our own assumptions about how market participants would price the asset or liability.

Valuation techniques for assets and liabilities include methodologies such as the market approach, the income approach or the cost approach, and may use unobservable inputs such as projections, estimates and management’s interpretation of current market data. These unobservable inputs are only utilized to the extent that observable inputs are not available or cost-effective to obtain.

At March 31, 2013 and June 30, 2012, our assets and liabilities measured at fair value on a recurring basis were as follows:

	March 31, 2013								June 30, 2012
	Fair Value Measurements Using Input Types								Fair Value Measurements Using Input Types
(in thousands)	Level 1		Level 2		Level 3		Total		Level 1		Level 2		Level 3		Total
Money market funds (cash and cash equivalents)	$	26,465	$	—	$	—	$	26,465	$	65,743	$	—	$	—	$	65,743

Fair Value of Financial Instruments

We have certain financial instruments which consist of cash and cash equivalents, marketable securities, accounts receivable, accounts payable and convertible notes (the Notes, as defined in Note 10 below). Fair value information for each of these instruments is as follows:

• Cash and cash equivalents, accounts receivable and accounts payable fair value approximates their carrying values, due to the short-term nature of these instruments.

• Marketable securities are classified as held to maturity and recorded at amortized cost which, at March 31, 2013 and June 30, 2012, approximated fair value. These investments all mature within one year.

• The Notes were recorded at $133.3 million upon issuance, which reflected the principal amount of the Notes less the fair value of the embedded conversion option (Conversion Feature). The carrying value of the Notes will be accreted, over the remaining term to maturity, to their principal value of $189.8 million. The fair value of the Notes (inclusive of the Conversion Feature) was approximately $221.5 million as of March 31, 2013. We estimated the fair value of the Notes by reference to quoted market prices; however the Notes have only a limited trading volume and as such this fair value estimate is not necessarily the value at which the Notes could be retired or transferred.

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Operations by Segments and Geographic Areas - Additional Information (Detail)	9 Months Ended
	Mar. 31, 2013 Segment
Segment Reporting [Abstract]
Number of reportable segments	3

XML

Goodwill and Other Intangible Assets - Schedule of Estimated Amortization Expense (Detail) (USD $) In Thousands, unless otherwise specified	Mar. 31, 2013
Goodwill And Intangible Assets Disclosure [Abstract]
2013	$ 19,480
2014	15,711
2015	13,618
2016	11,564
2017	9,234
2018 and thereafter	$ 32,822

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Condensed Consolidated Balance Sheets (USD $) In Thousands, unless otherwise specified	Mar. 31, 2013	Jun. 30, 2012
Current assets:
Cash and cash equivalents	$ 283,973	$ 124,801
Marketable securities	63	61
Accounts receivable, net of allowance for doubtful accounts of $829 at March 31, 2013 and $586 at June 30, 2012	46,978	45,344
Inventory, net	365	480
Deferred tax assets	7,021	6,773
Prepaid expenses and other current assets	7,301	8,212
Total current assets	345,701	185,671
Property, plant and equipment, net	22,865	19,756
Goodwill	109,055	98,974
Intangible assets, net	87,754	78,967
Other assets	15,528	9,003
Total assets	580,903	392,371
Current liabilities:
Accounts payable	8,752	8,841
Accrued expenses	17,533	17,170
Deferred revenue	46,312	41,304
Total current liabilities	72,597	67,315
Convertible senior notes	136,140
Deferred revenue, non-current	7,572	7,072
Deferred income taxes	5,813	1,641
Other liabilities	3,246	2,157
Total liabilities	225,368	78,185
Stockholders' equity:
Preferred Stock, $.001 par value: Authorized shares-4,000; issued and outstanding shares-none
Common Stock, $.001 par value: Authorized shares-100,000 at March 31, 2013 and 50,000 at June 30, 2012; issued shares-37,655 at March 31, 2013, and 36,672 at June 30, 2012; outstanding shares-35,807 at March 31, 2013, and 34,741 at June 30, 2012	38	37
Additional paid-in capital	493,938	438,732
Accumulated other comprehensive loss	(10,244)	(6,564)
Treasury stock: 1,858 shares at March 31, 2013, and 1,931 shares at June 30, 2012, at cost	(21,888)	(22,291)
Accumulated deficit	(106,309)	(95,728)
Total stockholders' equity	355,535	314,186
Total liabilities and stockholders' equity	$ 580,903	$ 392,371

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Convertible Senior Notes - Net Carrying Amount of Convertible Notes (Detail) (USD $) In Thousands, unless otherwise specified	Mar. 31, 2013
Debt Disclosure [Abstract]
Principal amount	$ 189,750
Unamortized discount	(53,610)
Net carrying value	$ 136,140

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Basis of Presentation

9 Months Ended

Mar. 31, 2013

Accounting Policies [Abstract]

Basis of Presentation

Note 1—Basis of Presentation

The accompanying unaudited condensed consolidated financial statements have been prepared in accordance with accounting principles generally accepted in the United States for interim financial information and with the instructions to Form 10-Q and Article 10 of Regulation S-X. Accordingly, they do not include all of the information and footnotes required by accounting principles generally accepted in the United States for complete financial statements. In the opinion of management, all adjustments (consisting of normal recurring accruals and adjustments) considered necessary for a fair presentation of the interim financial information have been included. Operating results for the three and nine months ended March 31, 2013 are not necessarily indicative of the results that may be expected for any other interim period or for the fiscal year ending June 30, 2013. For further information, refer to the financial statements and footnotes included in our Annual Report on Form 10-K as filed with the Securities and Exchange Commission (SEC) on August 27, 2012.

During fiscal year 2013, we changed the classification of certain employee related expenses from Cost of Revenue – Subscription and Transactions to Operating Expenses – Sales and Marketing. To ensure a consistent financial statement presentation, these changes are reflected for all periods presented.

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Operations by Segments and Geographic Areas - Schedule of Segment Depreciation Expense Included in Segment Measure of Profit (Loss) (Detail) (USD $) In Thousands, unless otherwise specified	3 Months Ended		9 Months Ended
	Mar. 31, 2013	Mar. 31, 2012	Mar. 31, 2013	Mar. 31, 2012
Depreciation expense:
Depreciation expense	$ 1,752	$ 1,429	$ 5,193	$ 4,214
Payments and Transactional Documents [Member]
Depreciation expense:
Depreciation expense	493	408	1,493	1,199
Banking Solutions [Member]
Depreciation expense:
Depreciation expense	571	278	1,611	758
Outsourced Solutions [Member]
Depreciation expense:
Depreciation expense	$ 688	$ 743	$ 2,089	$ 2,257

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Goodwill and Other Intangible Assets (Tables)

9 Months Ended

Mar. 31, 2013

Goodwill And Intangible Assets Disclosure [Abstract]

Schedule of Intangible Assets Subject to Amortization and Intangible Assets Not Subject to Amortization

The following tables set forth the information for intangible assets subject to amortization and for intangible assets not subject to amortization. Other intangible assets consist of acquired tradenames, backlog, patents and below market lease arrangements.

	As of March 31, 2013
	Gross Carrying Amount		Accumulated Amortization			Net Carrying Value		Weighted Average Remaining Life
	(in thousands)							(in years)
Amortized intangible assets:
Customer related	$	131,386	$	(67,016	)	$	64,370		11.2
Core technology		50,632		(34,523	)		16,109		6.9
Other intangible assets		11,934		(4,659	)		7,275		5.4
Total	$	193,952	$	(106,198	)	$	87,754
Unamortized intangible assets:
Goodwill							109,055
Total intangible assets						$	196,809

	As of June 30, 2012
	Gross Carrying Amount		Accumulated Amortization			Net Carrying Value		Weighted Average Remaining Life
	(in thousands)							(in years)
Amortized intangible assets:
Customer related	$	111,159	$	(58,653	)	$	52,506		10.7
Core technology		48,534		(31,179	)		17,355		7.5
Other intangible assets		11,801		(2,695	)		9,106		5.9
Total	$	171,494	$	(92,527	)	$	78,967
Unamortized intangible assets:
Goodwill							98,974
Total intangible assets						$	177,941

Schedule of Estimated Amortization Expense

Estimated amortization expense for fiscal year 2013 and subsequent fiscal years is as follows:

	(in thousands)
2013	$	19,480
2014		15,711
2015		13,618
2016		11,564
2017		9,234
2018 and thereafter		32,822

Schedule of Rollforward of Goodwill Balances, by Reportable Segment

The following table represents a rollforward of our goodwill balances, by reportable segment, as follows:

	Payments and Transactional Documents			Banking Solutions		Outsourced Solutions
	(in thousands)
Balance at June 30, 2012	$	54,329		$	8,420	$	36,225
Goodwill acquired during the period		11,784			—		—
Purchase accounting adjustments		—			33		—
Impact of foreign currency translation		(1,462	)		—		(274	)
Balance at March 31, 2013	$	64,651		$	8,453	$	35,951

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Operations by Segments and Geographic Areas - Schedule of Revenue Based on Point of Sale (Detail) (USD $) In Thousands, unless otherwise specified	3 Months Ended		9 Months Ended
	Mar. 31, 2013	Mar. 31, 2012	Mar. 31, 2013	Mar. 31, 2012
Revenues from unaffiliated customers:
Revenues from unaffiliated customers	$ 64,444	$ 55,316	$ 189,742	$ 162,886
United States [Member]
Revenues from unaffiliated customers:
Revenues from unaffiliated customers	41,390	37,310	126,157	110,202
United Kingdom [Member]
Revenues from unaffiliated customers:
Revenues from unaffiliated customers	21,164	16,284	57,991	47,507
Continental Europe [Member]
Revenues from unaffiliated customers:
Revenues from unaffiliated customers	1,079	910	3,241	2,903
Asia-Pacific [Member]
Revenues from unaffiliated customers:
Revenues from unaffiliated customers	$ 811	$ 812	$ 2,353	$ 2,274

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Convertible Senior Notes (Tables)

9 Months Ended

Mar. 31, 2013

Debt Disclosure [Abstract]

Net Carrying Amount of Convertible Notes

The net carrying amount of the convertible notes at March 31, 2013 was as follows:

	(in thousands)
Principal amount	$	189,750
Unamortized discount		(53,610	)
Net carrying value	$	136,140

Total Interest Expense Related to Convertible Notes

The following table sets forth total interest expense related to the convertible notes:

	Three Months Ended March 31,						Nine Months Ended March 31,
	2013			2012			2013			2012
	(in thousands)
Contractual interest expense (cash)	$	712			—		$	862			—
Amortization of debt issue costs (non-cash)		297			—			358			—
Amortization of debt discount (non-cash)		2,399			—			2,884			—
	$	3,408			—		$	4,104			—
Effective interest rate of the liability component		7.18	%		—	%		7.17	%		—	%

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Recent Accounting Pronouncements

9 Months Ended

Mar. 31, 2013

Text Block [Abstract]

Recent Accounting Pronouncements

Note 2—Recent Accounting Pronouncements

In June 2011, the Financial Accounting Standards Board (FASB) issued an accounting standards update regarding the presentation of comprehensive income in financial statements. The provisions of this standard provided an option to present the components of net income or loss and other comprehensive income or loss either as one continuous statement or as two separate but consecutive statements. We incorporated the continuous statement option of this standard effective with the period ending September 30, 2012. This changed the manner in which we present comprehensive income or loss in our overall financial statements, but did not result in any other accounting or financial reporting impact to us.

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Condensed Consolidated Balance Sheets (Parenthetical) (USD $) In Thousands, except Per Share data, unless otherwise specified	Mar. 31, 2013	Jun. 30, 2012
Statement Of Financial Position [Abstract]
Accounts receivable, net of allowances for doubtful accounts and returns	$ 829	$ 586
Preferred Stock, $.001 par value	$ 0.001	$ 0.001
Authorized shares	4,000	4,000
Issued shares	0	0
Outstanding shares	0	0
Common Stock, $.001 par value	$ 0.001	$ 0.001
Authorized shares	100,000	50,000
Issued shares	37,655	36,672
Outstanding shares	35,807	34,741
Treasury stock, shares	1,858	1,931

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Contingencies

9 Months Ended

Mar. 31, 2013

Commitments And Contingencies Disclosure [Abstract]

Contingencies

Note 12—Contingencies

On June 29, 2012, ACI Worldwide, Inc. (ACI) filed a lawsuit in the Superior Court of Fulton County, Georgia against us and one of our employees alleging, among other things, tortious interference with contract and business relations, unjust enrichment and violation of the Georgia Trade Secrets Act of 1990, in connection with our hiring of several former ACI employees. The complaint sought injunctive relief, costs and unspecified monetary damages. This lawsuit was subsequently removed to the U.S. District Court for the Northern District of Georgia, Atlanta Division. The lawsuit was settled by the parties on January 21, 2013 and the case was dismissed with prejudice on February 4, 2013. The lawsuit and the settlement did not have a material adverse effect on our financial statements.

On February 12, 2013 R&N Check Corp (R&N) filed a lawsuit against us in the Superior Court of Rockingham County, New Hampshire. The lawsuit alleges breach of contract in connection with a patent purchase and settlement agreement that we entered into in January 2006 and seeks unspecified damages and recovery of legal costs. On March 18, 2013 we removed the lawsuit to the United States District Court for the District of New Hampshire and R&N thereafter filed a motion to remand to the New Hampshire state court. We intend to vigorously defend ourselves in this matter and do not currently believe that the outcome of this action will have a material adverse consequence on our financial statements.

We are, from time to time, a party to other legal proceedings and claims that arise out of the ordinary course of our business. We do not currently believe that there are claims or proceedings pending against us for which the ultimate resolution would have a material effect on, or require disclosure in our financial statements.

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Document and Entity Information	9 Months Ended
	Mar. 31, 2013	Apr. 30, 2013
Document Document And Entity Information [Abstract]
Document Type	10-Q
Amendment Flag	false
Document Period End Date	Mar. 31, 2013
Document Fiscal Year Focus	2013
Document Fiscal Period Focus	Q3
Trading Symbol	EPAY
Entity Registrant Name	BOTTOMLINE TECHNOLOGIES INC /DE/
Entity Central Index Key	0001073349
Current Fiscal Year End Date	--06-30
Entity Filer Category	Large Accelerated Filer
Entity Common Stock, Shares Outstanding		37,824,998

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Fair Value (Tables)

9 Months Ended

Mar. 31, 2013

Fair Value Disclosures [Abstract]

Schedule of Assets and Liabilities Measured at Fair Value on Recurring Basis

At March 31, 2013 and June 30, 2012, our assets and liabilities measured at fair value on a recurring basis were as follows:

	March 31, 2013								June 30, 2012
	Fair Value Measurements Using Input Types								Fair Value Measurements Using Input Types
(in thousands)	Level 1		Level 2		Level 3		Total		Level 1		Level 2		Level 3		Total
Money market funds (cash and cash equivalents)	$	26,465	$	—	$	—	$	26,465	$	65,743	$	—	$	—	$	65,743

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Condensed Consolidated Statements of Comprehensive Income (Loss) (USD $) In Thousands, except Per Share data, unless otherwise specified	3 Months Ended		9 Months Ended
	Mar. 31, 2013	Mar. 31, 2012	Mar. 31, 2013	Mar. 31, 2012
Revenues:
Subscriptions and transactions	$ 28,749	$ 20,374	$ 87,657	$ 57,022
Software licenses	7,048	4,158	17,216	12,593
Service and maintenance	26,809	28,876	78,999	87,392
Equipment and supplies	1,838	1,908	5,870	5,879
Total revenues	64,444	55,316	189,742	162,886
Cost of revenues:
Subscriptions and transactions	16,851	10,571	47,075	28,576
Software licenses	952	656	1,978	1,620
Service and maintenance	11,081	13,264	35,352	38,663
Equipment and supplies	1,383	1,514	4,445	4,650
Total cost of revenues	30,267	26,005	88,850	73,509
Gross profit	34,177	29,311	100,892	89,377
Operating expenses:
Sales and marketing	16,215	12,536	46,643	35,503
Product development and engineering	8,454	7,496	25,186	19,360
General and administrative	6,554	5,660	19,582	15,505
Amortization of intangible assets	5,162	3,734	14,675	11,051
Total operating expenses	36,385	29,426	106,086	81,419
(Loss) income from operations	(2,208)	(115)	(5,194)	7,958
Gain (loss) on derivative instruments, net	482		(4,435)
Other (expense) income, net	(3,134)	119	(3,673)	34
(Loss) income before income taxes	(4,860)	4	(13,302)	7,992
Income tax (benefit) provision	(1,301)	1,336	(2,721)	5,119
Net (loss) income	(3,559)	(1,332)	(10,581)	2,873
Basic net (loss) income per share attributable to common stockholders:	$ (0.10)	$ (0.04)	$ (0.30)	$ 0.08
Diluted net (loss) income per share attributable to common stockholders:	$ (0.10)	$ (0.04)	$ (0.30)	$ 0.08
Shares used in computing basic net (loss) income per share attributable to common stockholders:	35,644	34,460	35,279	34,110
Shares used in computing diluted net (loss) income per share attributable to common stockholders:	35,644	34,460	35,279	35,179
Other comprehensive (loss) income, net of tax:
Foreign currency translation adjustments	(7,020)	1,628	(3,680)	(776)
Comprehensive (loss) income	$ (10,579)	$ 296	$ (14,261)	$ 2,097

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Income Taxes

9 Months Ended

Mar. 31, 2013

Income Tax Disclosure [Abstract]

Income Taxes

Note 7—Income Taxes

The income tax expense we record in any interim period is based on our estimated effective tax rate for the fiscal year. The calculation of our estimated effective tax rate requires an estimate of pretax income by tax jurisdiction, as well as total tax expense for the fiscal year. Accordingly, this tax rate is subject to adjustment if, in subsequent interim periods, there are changes to our initial estimates of total tax expense or pretax income, including income by jurisdiction.

We recorded an income tax benefit of $1.3 million and income tax expense of $1.3 million for the three months ended March 31, 2013 and 2012, respectively. The tax benefit arose principally from our US operations and was offset in part by tax expense associated with our UK and Australian operations. The tax benefit also included a tax benefit of $0.3 million resulting from the enactment on January 2, 2013 of the American Taxpayer Relief Act of 2012, which retroactively extended the US research and development credit for two years beginning January 1, 2012. The income tax expense recorded for the quarter ended March 31, 2012 was attributable to our UK, Australian, and US operations.

We recorded an income tax benefit of $2.7 million and income tax expense of $5.1 million for the nine months ended March 31, 2013 and 2012, respectively. The tax benefit arose principally from our US operations, offset in part by tax expense associated with our UK and Australian operations. The tax benefit also included a tax benefit of $0.3 million resulting from the enactment on January 2, 2013 of the American Taxpayer Relief Act of 2012, which retroactively extended the US research and development credit for two years beginning January 1, 2012. The income tax expense for the nine months ended March 31, 2012 was primarily attributable to our UK, Australian and US operations.

Excluding the impact of discrete events, the excess of our effective tax rate over statutory rates is due to our inability to utilize UK foreign tax credits in the determination of US taxable income. This has the effect of taxing certain income twice, once in the UK and again in the US, which results in a higher overall effective tax rate (or a decrease in our overall US tax benefit).

We currently anticipate that our unrecognized tax benefits will decrease within the next twelve months by approximately $0.1 million as a result of the expiration of certain statutes of limitations associated with intercompany transactions subject to tax in multiple jurisdictions.

We record a deferred tax asset if we believe it is more likely than not that we will recover that asset against future taxable income. In making this determination we consider historical and projected financial results, the planned reversal of existing deferred tax liabilities that provide a source of future taxable income and the availability of tax planning strategies. The Notes we issued in December 2012 will result in a significant future expense burden for interest expense, in particular non-cash interest expense, as the debt is accreted to the principal amount due on maturity. While we expect to deploy the debt proceeds in a manner that offsets the impact of this expense, if we are unable to do so, all or a portion of our US based deferred tax assets might become impaired which would give rise to the recognition of significant deferred tax expense in the period in which that determination was made.

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Operations by Segments and Geographic Areas

9 Months Ended

Mar. 31, 2013

Text Block [Abstract]

Operations by Segments and Geographic Areas

Note 6—Operations by Segments and Geographic Areas

Segment Information

Operating segments are the components of our business for which separate financial information is available that is evaluated regularly by the chief operating decision maker in deciding how to allocate resources and in assessing performance. Our chief operating decision maker is our chief executive officer. Our operating segments are organized principally by the type of product or service offered and by geography.

Similar operating segments have been aggregated into three reportable segments as follows:

Payments and Transactional Documents. Our Payments and Transactional Documents segment is a supplier of software products that provide a range of financial business process management solutions including making and collecting payments, sending and receiving invoices, and generating and storing business documents. This segment also incorporates our payments automation software for direct debit and receivables management and provides a range of standard professional services and equipment and supplies that complement and enhance our core software products. Revenue associated with the aforementioned products and services is typically recorded upon delivery. This segment also incorporates our check printing solutions in Europe as well as certain other solutions that are licensed on a subscription basis, revenue for which is typically recorded on a subscription or transaction basis or ratably over the expected life of the customer relationship.

Banking Solutions. The Banking Solutions segment provides solutions that are specifically designed for banking and financial institution customers. Our customized transaction banking solutions typically involve longer implementation periods and a significant level of professional services. Due to the customized nature of these products, revenue is generally recognized over the period of project performance on a percentage of completion basis. Periodically, we license these solutions on a subscription basis which has the effect of contributing to recurring revenue and the revenue predictability of future periods, but which also delays revenue recognition over a period that is longer than the period of project performance. This segment also includes our commercial banking business, which we acquired in March 2012. Our commercial banking products are Software as a Service (SaaS) offerings focused predominantly on medium-sized and small banks and financial institutions, and revenue for these products is typically recognized on a subscription or transaction basis or ratably over the estimated life of the customer relationship.

Outsourced Solutions. The Outsourced Solutions segment provides customers with outsourced and hosted SaaS offerings that facilitate electronic payment, electronic invoicing, and spend management. Our legal spend management solutions, which enable customers to create more efficient processes for managing invoices generated by outside law firms while offering insight into important legal spend factors such as expense monitoring and outside counsel performance, are included within this segment. This segment also incorporates our hosted and outsourced payments and accounts payable automation solutions, including Paymode-X and SWIFT Access Service. Revenue within this segment is generally recognized on a subscription or transaction basis or ratably over the estimated life of the customer relationship.

Periodically a sales person in one operating segment will sell products and services that are typically sold within a different operating segment. In such cases, the transaction is generally recorded by the operating segment to which the sales person is assigned. Accordingly, segment results can include the results of transactions that have been allocated to a specific segment based on the contributing sales resources, rather than the nature of the product or service. Conversely, a transaction can be recorded by the operating segment primarily responsible for delivery to the customer, even if the sales person is assigned to a different operating segment.

Our chief operating decision maker assesses segment performance based on a variety of factors that can include segment revenue and a segment measure of profit or loss. Each segment’s measure of profit or loss is on a pre-tax basis and excludes stock compensation expense, acquisition-related expenses (including acquisition related contingent consideration), amortization of intangible assets, impairment losses on equity investments, restructuring related charges and certain non-cash items related to our convertible notes. There are no inter-segment sales; accordingly, the measure of segment revenue and profit or loss reflects only revenues from external customers. The costs of certain corporate level expenses, primarily general and administrative expenses, are allocated to our operating segments at predetermined rates that are established as a percentage of the segment’s budgeted revenues.

We do not track or assign our assets by operating segment.

Segment information for the three and nine months ended March 31, 2013 and 2012 according to the segment descriptions above is as follows:

	Three Months Ended March 31,				Nine Months Ended March 31,
	2013		2012		2013		2012
	(in thousands)
Segment revenue:
Payments and Transactional Documents	$	29,642	$	25,254	$	84,050	$	75,063
Banking Solutions		17,051		14,051		52,025		40,438
Outsourced Solutions		17,751		16,011		53,667		47,385
Total segment revenue	$	64,444	$	55,316	$	189,742	$	162,886
Segment measure of profit:
Payments and Transactional Documents	$	7,906	$	5,415	$	21,274	$	17,574
Banking Solutions		1,336		1,485		4,170		6,371
Outsourced Solutions		1,530		1,653		6,206		6,888
Total measure of segment profit	$	10,772	$	8,553	$	31,650	$	30,833

A reconciliation of the measure of segment profit to GAAP operating (loss) income before income taxes is as follows:

	Three Months Ended March 31,						Nine Months Ended March 31,
	2013			2012			2013			2012
	(in thousands)
Segment measure of profit	$	10,772		$	8,553		$	31,650		$	30,833
Less:
Amortization of intangible assets		(5,162	)		(3,734	)		(14,675	)		(11,051	)
Stock compensation expense		(4,591	)		(3,719	)		(13,532	)		(10,257	)
Acquisition related expenses		(3,165	)		(706	)		(7,445	)		(1,007	)
Restructuring expenses		(62	)		(509	)		(1,192	)		(560	)
Add:
Gain (loss) on derivative instruments, net		482			—			(4,435	)		—
Other (expense) income, net		(3,134	)		119			(3,673	)		34
(Loss) income before income taxes	$	(4,860	)	$	4		$	(13,302	)	$	7,992

The following depreciation expense amounts are included in the segment measure of profit:

	Three Months Ended March 31,				Nine Months Ended March 31,
	2013		2012		2013		2012
	(in thousands)
Depreciation expense:
Payments and Transactional Documents	$	493	$	408	$	1,493	$	1,199
Banking Solutions		571		278		1,611		758
Outsourced Solutions		688		743		2,089		2,257
Total depreciation expense	$	1,752	$	1,429	$	5,193	$	4,214

Geographic Information

We have presented geographic information about our revenues below. This presentation allocates revenue based on the point of sale, not the location of the customer. Accordingly, we derive revenues from geographic locations based on the location of the customer that would vary from the geographic areas listed here; particularly in respect of financial institution customers located in Australia and Canada for which the point of sale was the United States.

	Three Months Ended March 31,				Nine Months Ended March 31,
	2013		2012		2013		2012
	(in thousands)
Revenues from unaffiliated customers:
United States	$	41,390	$	37,310	$	126,157	$	110,202
United Kingdom		21,164		16,284		57,991		47,507
Continental Europe		1,079		910		3,241		2,903
Asia-Pacific		811		812		2,353		2,274
Total revenues from unaffiliated customers	$	64,444	$	55,316	$	189,742	$	162,886

Long-lived assets, excluding deferred tax assets and intangible assets, which are based on geographical location, were as follows:

	March 31,		June 30,
	2013		2012
	(in thousands)
Long-lived assets
United States	$	30,623	$	19,189
United Kingdom		4,202		4,332
Continental Europe		28		5
Asia-Pacific		93		128
Total long-lived assets	$	34,946	$	23,654

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Restructuring Costs (Tables)

9 Months Ended

Mar. 31, 2013

Restructuring And Related Activities [Abstract]

Rollforward of Restructuring Activity

A rollforward of the restructuring activity for the nine months ended March 31, 2013 is as follows:

	Severance Costs (in thousands)			Facility Exit Costs (in thousands)
Accrued at June 30, 2012	$	228		$	—
Charged to expense		1,035			157
Payments charged against the accrual		(1,231	)		(157	)
Accrued at March 31, 2013	$	32		$	—

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Product and Business Acquisitions (Tables)

9 Months Ended

Mar. 31, 2013

Business Combinations [Abstract]

Allocation of Purchase

The allocation of the purchase price as of March 31, 2013 is as follows:

	(in thousands)
Current assets	$	6,442
Property and equipment		334
Customer related intangible assets		21,786
Core technology		1,920
Other intangible assets		145
Goodwill		10,725
Current liabilities		(3,726	)
Other liabilities		(5,489	)
Total purchase price	$	32,137

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Convertible Senior Notes

9 Months Ended

Mar. 31, 2013

Debt Disclosure [Abstract]

Convertible Senior Notes

Note 10—Convertible Senior Notes

On December 12, 2012, we issued $189.8 million aggregate principal amount of our 1.50% Convertible Senior Notes maturing on December 1, 2017 (the Notes), inclusive of the underwriters’ exercise in full of their over-allotment option of $24.8 million. Cash interest at a rate of 1.50% per year began to accrue on December 12, 2012 and is payable semi-annually on June 1 and December 1 of each year beginning on June 1, 2013. We received net proceeds from the offering of approximately $167.3 million after adjusting for debt issue costs, including the underwriting discount, as well as the net cash used to purchase the Note Hedges and sell the Warrants, as discussed below.

The Notes were issued under an indenture dated December 12, 2012 (the “Base Indenture”) by and between us and The Bank of New York Mellon Trust Company, N.A., as Trustee and a First Supplemental Indenture dated December 12, 2012 (the “First Supplemental Indenture”) by and between us and the Trustee (the Base Indenture and the First Supplemental Indenture are collectively referred to as the “Indenture”). There are no financial or operating covenants relating to the Notes.

The Notes are senior unsecured obligations of ours and rank senior in right of payment to any future unsecured indebtedness that is expressly subordinated in right of payment to the Notes, and equal in right of payment to any of our existing and future unsecured indebtedness that is not subordinated. The Notes are effectively junior in right of payment to any of our secured indebtedness (to the extent of the value of assets securing such indebtedness) and structurally junior to all existing and future indebtedness and other liabilities, including trade payables, of our subsidiaries. Prior to this offering, neither we nor our subsidiaries had any outstanding indebtedness for borrowed money. The Indenture does not limit the amount of debt that we or our subsidiaries may incur. The Notes are not guaranteed by us or any of our subsidiaries.

Holders may convert their Notes at their option, prior to the close of business on the business day immediately preceding June 1, 2017, in multiples of $1,000 principal amount, only under the following circumstances:

• during any calendar quarter commencing after the calendar quarter ending on March 31, 2013 (and only during such calendar quarter), if the last reported sale price of our common stock for at least 20 trading days (whether or not consecutive) during a period of 30 consecutive trading days ending on the last trading day of the immediately preceding calendar quarter is greater than or equal to 130% of the conversion price on each applicable trading day;

• during the five business day period after any five consecutive trading day period (the “measurement period”) in which the trading price per $1,000 principal amount of the convertible notes for each trading day of the measurement period was less than 98% of the product of the last reported sales price of our common stock and the conversion rate on each trading day; or

• upon the occurrence of specified corporate events, including a merger or a sale of all or substantially all of our assets.

On or after June 1, 2017 until the close of business on the second scheduled trading day immediately preceding the maturity date of December 1, 2017, holders may convert their Notes, in multiples of $1,000 principal amount, at the option of the holder regardless of the foregoing circumstances.

The conversion rate for the Notes is initially 33.3042 shares per $1,000 principal amount of Notes (equivalent to an initial conversion price of approximately $30.03 per share of our common stock). The conversion rate is subject to customary adjustment for certain events as described in the Indenture. At the time we issued the Notes and prior to January 17, 2013, we did not have a sufficient number of available authorized shares of our common stock to enable us to settle, with shares of our common stock, the maximum obligations we may have under the Conversion Feature of the Notes. Therefore the Notes required, prior to us receiving an approval from our shareholders to increase the authorized shares of our common stock to an amount that would allow us to settle the maximum potential obligations under the Conversion Feature in shares, that we settle any such obligation in cash. Accordingly, the Conversion Feature was initially recorded as a derivative liability, measured at fair value, in our balance sheet.

The principal balance of the Notes is always required to be settled in cash. However, the Notes provide that once we receive approval to increase our authorized shares of common stock to an amount that would permit us to settle the entire maximum conversion obligation in shares, we are permitted at our election to settle any conversion obligation in excess of the principal portion in cash, shares of our common stock, or a combination of cash and shares of our common stock.

On January 17, 2013, our shareholders approved a proposal to amend our Amended and Restated Certificate of Incorporation to increase our authorized shares from 50,000,000 to 100,000,000 shares which is a sufficient number of shares to enable us to settle the entire maximum potential obligation under the Conversion Feature in shares, should we so elect. Accordingly, as of January 17, 2013 the Conversion Feature met the stockholders equity classification requirements and was re-measured at fair value as of that date, with the change in fair value reflected in earnings, and was reclassified from a liability to stockholders equity, net of taxes.

We may not redeem the Notes prior to their maturity date. If we undergo a fundamental change, (as described in the Indenture), subject to certain conditions, holders may require us to repurchase for cash all or part of their Notes in principal amounts of $1,000 or an integral multiple thereof. The fundamental change repurchase price will be equal to 100% of the principal amount of the Notes to be repurchased, plus accrued and unpaid interest to, but excluding, the fundamental change repurchase date.

The Indenture contains customary events of default with respect to the Notes and provides that upon certain events of default occurring and continuing the Trustee may, and the Trustee at the request of such holders of at least 25% in principal amount of the convertible notes shall, declare 100% of the principal of and accrued and unpaid interest, if any, on the Notes to be due and payable. In case of certain events of bankruptcy, insolvency or reorganization, involving us or a significant subsidiary, 100% of the principal of and accrued and unpaid interest on the Notes will automatically become due and payable. Upon such a declaration of acceleration, such principal and accrued and unpaid interest, if any, will be due and payable immediately.

Under limited circumstances, we may be required to pay contingent interest on the Notes as a result of failure to comply with the reporting obligations in the Indenture or failure to file required Securities and Exchange Commission documents and reports. When applicable, the contingent interest payable per $1,000 principal amount is 0.25% per annum over the applicable term as provided under the Indenture. The contingent interest features of the Notes are embedded derivative instruments. The estimated fair value of the contingent interest features of the Notes was zero at issuance and at March 31, 2013, as the likelihood of any liability being incurred under these provisions was deemed remote and, to the extent occurring, the time period during which a contingent interest charge would apply is projected to be short.

The Notes were recorded upon issuance using a residual method of valuation, meaning since the Conversion Feature was initially a derivative instrument recorded at fair value, we allocated debt proceeds to the Conversion Feature based on the fair value of that instrument and the residual proceeds were allocated to the Notes. The carrying amount of the Notes will be accreted to the principal amount over the remaining term to maturity and we will record a corresponding charge to interest expense.

The net carrying amount of the convertible notes at March 31, 2013 was as follows:

	(in thousands)
Principal amount	$	189,750
Unamortized discount		(53,610	)
Net carrying value	$	136,140

We incurred certain third party costs in connection with our issuance of the Notes, principally related to underwriting and legal fees, which will be amortized to interest expense ratably over the five-year term of the Notes.

The following table sets forth total interest expense related to the convertible notes:

	Three Months Ended March 31,						Nine Months Ended March 31,
	2013			2012			2013			2012
	(in thousands)
Contractual interest expense (cash)	$	712			—		$	862			—
Amortization of debt issue costs (non-cash)		297			—			358			—
Amortization of debt discount (non-cash)		2,399			—			2,884			—
	$	3,408			—		$	4,104			—
Effective interest rate of the liability component		7.18	%		—	%		7.17	%		—	%

Note Hedges

In December 2012, we entered into privately negotiated transactions to purchase hedge instruments (the Note Hedges), covering approximately 6.3 million shares of our common stock. The Note Hedges are subject to anti-dilution provisions substantially similar to those of the Notes, have a strike price that corresponds to the conversion price of the Notes, are exercisable by us upon any conversion under the Notes and expire on December 1, 2017.

The Note Hedges are generally expected to reduce the potential dilution to our common stock (or, in the event the Conversion Feature is settled in cash, to reduce our cash payment obligation) in the event that at the time of conversion our stock price exceeds the conversion price under the Notes. The cost of the Note Hedges, $42.3 million, is expected to be tax deductible as an original issue discount over the life of the Notes, as the Notes and the Note Hedges represent an integrated debt instrument for tax purposes.

The Note Hedges did not initially satisfy the accounting requirements necessary for classification within stockholders equity, as upon issuance and prior to January 17, 2013 any transaction under the Note Hedges was required to be settled in cash. Accordingly, the Note Hedges were initially recorded as a derivative asset, measured at fair value, in our balance sheet.

As of January 17, 2013, the Note Hedges met the stockholders equity classification requirements as we had an adequate level of authorized shares to permit us to settle the Note Hedges in shares of our common stock. Accordingly, on January 17, 2013 we re-measured the Note Hedges at fair value, with the change in fair value reflected in earnings, and this amount was reclassified from an asset to stockholders equity, net of tax.

The Note Hedges are transactions that are separate from the terms of the Notes and the Warrants (discussed below) and holders of the Notes and the Warrants have no rights with respect to the Note Hedges.

Warrants

In December 2012, we received aggregate proceeds of $25.8 million, net of issue costs, from the sale of warrants (the Warrants), for the purchase of up to 6.3 million shares of our common stock, subject to antidilution adjustments, at a strike price of $40.04 per share. The Warrants are exercisable in equal tranches over a period of 150 days beginning on March 1, 2018 and ending on October 18, 2018.

The Warrants are also derivative instruments. A portion of the Warrants met the stockholders equity classification requirements upon issuance and, as such, were recorded in equity as of that date. Certain of the Warrants, however, did not satisfy the requirements necessary for classification within stockholders equity as, for the period of December 6, 2012 through December 12, 2012 we would have been required, under specific circumstances, to settle obligations with the counterparty to those Warrants in cash. Accordingly, for this period, the Warrants for which cash settlement might have been required were recorded as a derivative liability. The requirement to potentially cash settle a portion of the Warrants expired on December 12, 2012, and we did not incur any actual cash payment obligation thereunder prior to that date. On December 12, 2012 we re-measured the fair value of those Warrants that were initially recorded as a derivative liability and recorded a $2.8 million loss related to a change in fair value. Since as of December 12, 2012 we met the stockholders equity classification requirements, the fair value of the Warrants were reclassified to stockholders equity as of that date.

The Warrants are transactions that are separate from the terms of the Notes and the Note Hedges, and holders of the Notes and Note Hedges have no rights with respect to the Warrants.

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Goodwill and Other Intangible Assets

9 Months Ended

Mar. 31, 2013

Goodwill And Intangible Assets Disclosure [Abstract]

Goodwill and Other Intangible Assets

Note 8—Goodwill and Other Intangible Assets

The following tables set forth the information for intangible assets subject to amortization and for intangible assets not subject to amortization. Other intangible assets consist of acquired tradenames, backlog, patents and below market lease arrangements.

	As of March 31, 2013
	Gross Carrying Amount		Accumulated Amortization			Net Carrying Value		Weighted Average Remaining Life
	(in thousands)							(in years)
Amortized intangible assets:
Customer related	$	131,386	$	(67,016	)	$	64,370		11.2
Core technology		50,632		(34,523	)		16,109		6.9
Other intangible assets		11,934		(4,659	)		7,275		5.4
Total	$	193,952	$	(106,198	)	$	87,754
Unamortized intangible assets:
Goodwill							109,055
Total intangible assets						$	196,809

	As of June 30, 2012
	Gross Carrying Amount		Accumulated Amortization			Net Carrying Value		Weighted Average Remaining Life
	(in thousands)							(in years)
Amortized intangible assets:
Customer related	$	111,159	$	(58,653	)	$	52,506		10.7
Core technology		48,534		(31,179	)		17,355		7.5
Other intangible assets		11,801		(2,695	)		9,106		5.9
Total	$	171,494	$	(92,527	)	$	78,967
Unamortized intangible assets:
Goodwill							98,974
Total intangible assets						$	177,941

Estimated amortization expense for fiscal year 2013 and subsequent fiscal years is as follows:

	(in thousands)
2013	$	19,480
2014		15,711
2015		13,618
2016		11,564
2017		9,234
2018 and thereafter		32,822

The following table represents a rollforward of our goodwill balances, by reportable segment, as follows:

	Payments and Transactional Documents			Banking Solutions		Outsourced Solutions
	(in thousands)
Balance at June 30, 2012	$	54,329		$	8,420	$	36,225
Goodwill acquired during the period		11,784			—		—
Purchase accounting adjustments		—			33		—
Impact of foreign currency translation		(1,462	)		—		(274	)
Balance at March 31, 2013	$	64,651		$	8,453	$	35,951

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Restructuring Costs

9 Months Ended

Mar. 31, 2013

Restructuring And Related Activities [Abstract]

Restructuring Costs

Note 9—Restructuring Costs

During the nine months ended March 31, 2013, in response to recent acquisitions and business events, we realigned our workforce and recorded pre-tax restructuring expenses associated with severance related benefits to employees and facility exit costs.

A rollforward of the restructuring activity for the nine months ended March 31, 2013 is as follows:

	Severance Costs (in thousands)			Facility Exit Costs (in thousands)
Accrued at June 30, 2012	$	228		$	—
Charged to expense		1,035			157
Payments charged against the accrual		(1,231	)		(157	)
Accrued at March 31, 2013	$	32		$	—

In addition to the costs associated with severance related benefits and facility exit costs noted above, we also recorded $0.3 million of expense related to stock based compensation during the nine months ended March 31, 2013.

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Derivative Instruments

9 Months Ended

Mar. 31, 2013

Derivative Instruments And Hedging Activities Disclosure [Abstract]

Derivative Instruments

Note 11—Derivative Instruments

Our derivative instruments for the three and nine month periods ending March 31, 2013 consisted of the Note Hedges, Conversion Feature and Warrants as discussed in Note 10. As of March 31, 2013 each of these instruments met the classification requirements for inclusion within stockholders equity and as such they are not subject to on-going fair value re-measurement. We are required, for the remaining term of the Notes, to assess whether we continue to meet the stockholders equity classification requirements. If in any future period we fail to satisfy those requirements we would need to reclassify the derivative instruments out of stockholders equity, to either assets or liabilities depending on their nature, and record those instruments at fair value with changes in fair value reflected in earnings.

Changes in the fair value of our derivative instruments, prior to and as of the date of reclassification to stockholders equity, were recognized in earnings as a component of “Gain (loss) on derivative instruments, net”. The following table summarizes our net loss on changes in fair value (in thousands) and provides a rollforward of activity from inception through March 31, 2013. The Conversion Feature and Note Hedges are not actively traded and were valued using an option pricing model that uses observable and unobservable market data for inputs including the trading price and implied volatility of our common stock, risk-free interest rate and other factors.

The gain (loss) as a result of changes in the fair value of our derivative instruments for the three and nine months ended March 31, 2013 is as follows:

	Fair Value at December 31, 2012		Fair Value upon reclassification to equity			Fair Value at March 31, 2013		Gain/(loss) on derivative instruments for the three months ending March 31, 2013
Note Hedges	$	47,817	$	50,086	1	$	n/a	$	2,269
Conversion Feature		64,009		65,796	1		n/a		(1,787	)
Net gain on derivative instruments								$	482

	Fair Value at Inception		Fair Value upon reclassification to equity			Fair Value at March 31, 2013		Gain/(loss) on derivative instruments for the nine months ending March 31, 2013
Note Hedges	$	42,390	$	50,086	1	$	n/a	$	7,696
Conversion Feature		56,495		65,796	1		n/a		(9,301	)
Warrants		12,950		15,780	2		n/a		(2,830	)
Net loss on derivative instruments								$	(4,435	)

¹  The requirements for stockholders equity classification for the Note Hedges and Conversion Feature were met as of January 17, 2013 and, as of that date, we re-measured the fair value of these instruments and reclassified those amounts to stockholders equity. The fair values and resulting gain or loss are based on re-measurement at January 17, 2013.

² The conditions that gave rise to the potential cash settlement of a portion of the Warrants expired on December 12, 2012 and, as of that date, we re-measured the fair value of these instruments and reclassified that amount to stockholders equity. The fair value and resulting loss is based on re-measurement at December 12, 2012.

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Operations by Segments and Geographic Areas - Reconciliation of Measure of Segment Profit to Gaap Operating Income Before Income Taxes (Detail) (USD $) In Thousands, unless otherwise specified	3 Months Ended		9 Months Ended
	Mar. 31, 2013	Mar. 31, 2012	Mar. 31, 2013	Mar. 31, 2012
Segment Reporting [Abstract]
Segment measure of profit	$ 10,772	$ 8,553	$ 31,650	$ 30,833
Less:
Amortization of intangible assets	(5,162)	(3,734)	(14,675)	(11,051)
Stock compensation expense	(4,591)	(3,719)	(13,532)	(10,257)
Acquisition related expenses	(3,165)	(706)	(7,445)	(1,007)
Restructuring expenses	(62)	(509)	(1,192)	(560)
Add:
Gain (loss) on derivative instruments, net	482		(4,435)
Other (expense) income, net	(3,134)	119	(3,673)	34
(Loss) income before income taxes	$ (4,860)	$ 4	$ (13,302)	$ 7,992

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Operations by Segments and Geographic Areas (Tables)

9 Months Ended

Mar. 31, 2013

Text Block [Abstract]

Schedule of Segment Reporting Information

Segment information for the three and nine months ended March 31, 2013 and 2012 according to the segment descriptions above is as follows:

	Three Months Ended March 31,				Nine Months Ended March 31,
	2013		2012		2013		2012
	(in thousands)
Segment revenue:
Payments and Transactional Documents	$	29,642	$	25,254	$	84,050	$	75,063
Banking Solutions		17,051		14,051		52,025		40,438
Outsourced Solutions		17,751		16,011		53,667		47,385
Total segment revenue	$	64,444	$	55,316	$	189,742	$	162,886
Segment measure of profit:
Payments and Transactional Documents	$	7,906	$	5,415	$	21,274	$	17,574
Banking Solutions		1,336		1,485		4,170		6,371
Outsourced Solutions		1,530		1,653		6,206		6,888
Total measure of segment profit	$	10,772	$	8,553	$	31,650	$	30,833

Reconciliation of Measure of Segment Profit to Gaap Operating Income Before Income Taxes

A reconciliation of the measure of segment profit to GAAP operating (loss) income before income taxes is as follows:

	Three Months Ended March 31,						Nine Months Ended March 31,
	2013			2012			2013			2012
	(in thousands)
Segment measure of profit	$	10,772		$	8,553		$	31,650		$	30,833
Less:
Amortization of intangible assets		(5,162	)		(3,734	)		(14,675	)		(11,051	)
Stock compensation expense		(4,591	)		(3,719	)		(13,532	)		(10,257	)
Acquisition related expenses		(3,165	)		(706	)		(7,445	)		(1,007	)
Restructuring expenses		(62	)		(509	)		(1,192	)		(560	)
Add:
Gain (loss) on derivative instruments, net		482			—			(4,435	)		—
Other (expense) income, net		(3,134	)		119			(3,673	)		34
(Loss) income before income taxes	$	(4,860	)	$	4		$	(13,302	)	$	7,992

Schedule of Segment Depreciation Expense Included in Segment Measure of Profit (Loss)

The following depreciation expense amounts are included in the segment measure of profit:

	Three Months Ended March 31,				Nine Months Ended March 31,
	2013		2012		2013		2012
	(in thousands)
Depreciation expense:
Payments and Transactional Documents	$	493	$	408	$	1,493	$	1,199
Banking Solutions		571		278		1,611		758
Outsourced Solutions		688		743		2,089		2,257
Total depreciation expense	$	1,752	$	1,429	$	5,193	$	4,214

Schedule of Revenue Based on Point of Sale

We have presented geographic information about our revenues below. This presentation allocates revenue based on the point of sale, not the location of the customer. Accordingly, we derive revenues from geographic locations based on the location of the customer that would vary from the geographic areas listed here; particularly in respect of financial institution customers located in Australia and Canada for which the point of sale was the United States.

	Three Months Ended March 31,				Nine Months Ended March 31,
	2013		2012		2013		2012
	(in thousands)
Revenues from unaffiliated customers:
United States	$	41,390	$	37,310	$	126,157	$	110,202
United Kingdom		21,164		16,284		57,991		47,507
Continental Europe		1,079		910		3,241		2,903
Asia-Pacific		811		812		2,353		2,274
Total revenues from unaffiliated customers	$	64,444	$	55,316	$	189,742	$	162,886

Schedule of Long-Lived Assets, Excluding Deferred Tax Assets and Intangible Assets, Based on Geographic Designation

Long-lived assets, excluding deferred tax assets and intangible assets, which are based on geographical location, were as follows:

	March 31,		June 30,
	2013		2012
	(in thousands)
Long-lived assets
United States	$	30,623	$	19,189
United Kingdom		4,202		4,332
Continental Europe		28		5
Asia-Pacific		93		128
Total long-lived assets	$	34,946	$	23,654

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Fair Value - Schedule of Assets and Liabilities Measured at Fair Value on Recurring Basis (Detail) (Recurring [Member], USD $) In Thousands, unless otherwise specified	Mar. 31, 2013	Jun. 30, 2012
Fair Value, Assets and Liabilities Measured on Recurring and Nonrecurring Basis [Line Items]
Money market funds (cash and cash equivalents)	$ 26,465	$ 65,743
Level 1 [Member]
Fair Value, Assets and Liabilities Measured on Recurring and Nonrecurring Basis [Line Items]
Money market funds (cash and cash equivalents)	26,465	65,743
Level 2 [Member]
Fair Value, Assets and Liabilities Measured on Recurring and Nonrecurring Basis [Line Items]
Money market funds (cash and cash equivalents)
Level 3 [Member]
Fair Value, Assets and Liabilities Measured on Recurring and Nonrecurring Basis [Line Items]
Money market funds (cash and cash equivalents)

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Goodwill and Other Intangible Assets - Rollforward of Goodwill Balances by Reportable Segment (Detail) (USD $) In Thousands, unless otherwise specified	9 Months Ended
	Mar. 31, 2013
Payments and Transactional Documents [Member]
Finite-Lived Intangible Assets [Line Items]
Balance at June 30, 2012	$ 54,329
Goodwill acquired during the period	11,784
Purchase accounting adjustments
Impact of foreign currency translation	(1,462)
Balance at March 31, 2013	64,651
Banking Solutions [Member]
Finite-Lived Intangible Assets [Line Items]
Balance at June 30, 2012	8,420
Goodwill acquired during the period
Purchase accounting adjustments	33
Impact of foreign currency translation
Balance at March 31, 2013	8,453
Outsourced Solutions [Member]
Finite-Lived Intangible Assets [Line Items]
Balance at June 30, 2012	36,225
Goodwill acquired during the period
Purchase accounting adjustments
Impact of foreign currency translation	(274)
Balance at March 31, 2013	$ 35,951

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Condensed Consolidated Statements of Cash Flows (USD $) In Thousands, unless otherwise specified	9 Months Ended
	Mar. 31, 2013	Mar. 31, 2012
Operating activities:
Net (loss) income	$ (10,581)	$ 2,873
Adjustments to reconcile net (loss) income to net cash provided by operating activities:
Amortization of intangible assets	14,675	11,051
Stock compensation expense	13,532	10,257
Depreciation and amortization of property, plant and equipment	5,193	4,214
Deferred income tax (benefit) expense	(6,128)	1,414
Provision for allowances on accounts receivable	256	153
Provision for allowances for obsolescence of inventory	62	1
Shortfall (excess) tax benefits associated with stock compensation	15	(1,525)
Amortization of debt issuance costs	358
Amortization of debt discount	2,884
Loss on derivative instruments	4,435
Loss on disposal of equipment	87
Gain on foreign exchange	(19)	(10)
Changes in operating assets and liabilities:
Accounts receivable	(299)	(4,448)
Inventory	45	(18)
Prepaid expenses and other current assets	1,167	423
Other assets	317	(1,370)
Accounts payable	(273)	(863)
Accrued expenses	(1,026)	(1,174)
Deferred revenue	5,074	1,916
Other liabilities	573	440
Net cash provided by operating activities	30,347	23,334
Investing activities:
Acquisition of business, net of cash acquired	(33,323)	(27,375)
Purchases of held-to-maturity securities	(62)	(63)
Proceeds from sales of held-to-maturity securities	62	63
Purchases of property and equipment	(7,657)	(5,469)
Proceeds from disposal of fixed assets	56
Net cash used in investing activities	(40,924)	(32,844)
Financing activities:
Proceeds from issuance of convertible senior notes	189,750
Debt issuance costs	(5,883)
Proceeds from issuance of warrants, net of issue costs	25,776
Purchase of convertible note hedges	(42,390)
Proceeds from exercise of warrants, net		8,452
Proceeds from exercise of stock options and employee stock purchase plan	5,024	6,243
(Shortfall) excess tax benefits associated with stock compensation	(15)	1,525
Capital lease payments	(72)	(118)
Repurchase of common stock	(933)
Net cash provided by financing activities	171,257	16,102
Effect of exchange rate changes on cash	(1,508)	(273)
Increase in cash and cash equivalents	159,172	6,319
Cash and cash equivalents at beginning of period	124,801	111,953
Cash and cash equivalents at end of period	$ 283,973	$ 118,272

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Net Income Per Share

9 Months Ended

Mar. 31, 2013

Text Block [Abstract]

Net Income Per Share

Note 5—Net Income Per Share

The following table sets forth the computation of basic and diluted net income per share:

	Three Months Ended March 31,						Nine Months Ended March 31,
	2013			2012			2013			2012
	(in thousands)
Numerator:
Net (loss) income allocable to common stockholders	$	(3,559	)	$	(1,332	)	$	(10,581	)	$	2,873
Denominator:
Shares used in computing basic net (loss) income per share attributable to common stockholders		35,644			34,460			35,279			34,110
Effect of dilutive securities		—			—			—			1,069
Shares used in computing diluted net (loss) income per share attributable to common stockholders		35,644			34,460			35,279			35,179
Basic net (loss) income per share attributable to common stockholders	$	(0.10	)	$	(0.04	)	$	(0.30	)	$	0.08
Diluted net (loss) income per share attributable to common stockholders	$	(0.10	)	$	(0.04	)	$	(0.30	)	$	0.08

The calculation of basic net (loss) income per share is computed using the weighted average number of common shares outstanding during the period and excludes any dilutive effects of stock options, unvested restricted stock, stock warrants and the impact of shares that could be issued upon conversion or maturity of our convertible notes.

For the three and nine months ended March 31, 2013, 2.8 million and 3.0 million stock options and shares of restricted stock were excluded from the calculation of diluted earnings per share, respectively, as their effect would have been anti-dilutive.

For the three and nine months ended March 31, 2012, 3.1 million and zero stock options and shares of restricted stock were excluded from the calculation of diluted earnings per share, respectively, as their effect would have been anti-dilutive.

As more fully discussed in Note 10, in December 2012 we issued convertible notes maturing in December 2017. We intend, upon conversion or maturity of the Notes, to satisfy any conversion premium by issuing shares of our common stock. We have also issued warrants for up to 6.3 million shares of our common stock at an exercise price of $40.04 per share. For the three and nine months ended March 31, 2013, shares potentially issuable upon conversion or maturity of the Notes or upon exercise of the warrants were excluded from our earnings per share calculations as their effect would have been anti-dilutive.

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Fair Value - Additional Information (Detail) (USD $) In Millions, unless otherwise specified	3 Months Ended
	Mar. 31, 2013
Fair Value Disclosures [Abstract]
Issuance of convertible notes	$ 133.3
Convertible Senior Notes issued	189.8
Estimated fair value of convertible debt	$ 221.5

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Income Taxes - Additional Information (Detail) (USD $)	3 Months Ended		6 Months Ended	9 Months Ended		1 Months Ended
	Mar. 31, 2013	Mar. 31, 2012	Dec. 31, 2012	Mar. 31, 2013	Mar. 31, 2012	Jan. 02, 2013 Income Tax Benefit One[Member]	Jan. 02, 2013 Income Tax Benefit Two[Member]
Income Taxes [Line Items]
Income tax expense (benefit)	$ (1,301,000)	$ 1,336,000		$ (2,721,000)	$ 5,119,000
Tax benefit resulting from enactment						300,000	300,000
Unrecognized tax benefits decrease as a result of the expiration of certain statutes			$ 100,000

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Net Income Per Share (Tables)

9 Months Ended

Mar. 31, 2013

Text Block [Abstract]

Schedule of Computation of Basic and Diluted Net Income Per Share

The following table sets forth the computation of basic and diluted net income per share:

	Three Months Ended March 31,						Nine Months Ended March 31,
	2013			2012			2013			2012
	(in thousands)
Numerator:
Net (loss) income allocable to common stockholders	$	(3,559	)	$	(1,332	)	$	(10,581	)	$	2,873
Denominator:
Shares used in computing basic net (loss) income per share attributable to common stockholders		35,644			34,460			35,279			34,110
Effect of dilutive securities		—			—			—			1,069
Shares used in computing diluted net (loss) income per share attributable to common stockholders		35,644			34,460			35,279			35,179
Basic net (loss) income per share attributable to common stockholders	$	(0.10	)	$	(0.04	)	$	(0.30	)	$	0.08
Diluted net (loss) income per share attributable to common stockholders	$	(0.10	)	$	(0.04	)	$	(0.30	)	$	0.08