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Arrangements with Symphony Icon Inc (Details) (USD $)
3 Months Ended 6 Months Ended
Jun. 30, 2013
Jun. 30, 2012
Jun. 30, 2013
Jun. 30, 2012
Jul. 30, 2012
Jul. 30, 2010
Jun. 15, 2007
Loss Contingencies [Line Items]              
Holdings contribution to Icon             $ 45,000,000
Lexicon sold shares to Holdings             7,650,622
Lexicon received cash from Holdings             15,000,000
Lexicon paid Holdings cash           10,000,000  
Symphony base payment in shares         13,237,519    
Symphony base payment obligation         35,000,000    
Symphony contingent payment maximum           45,000,000  
Symphony contingent payment percentage           50.00%  
Symphony regulatory approval payment           15,000,000  
Symphony regulatory approval reduction percentage           50.00%  
Symphony regulatory approval percentage limit           50.00%  
Symphony payment in stock limitation           50.00%  
Symphony fair value of base and contingent payments           45,600,000  
Symphony base payment discount rate           14.00%  
Symphony contingent payment discount rate           18.00%  
Increase in fair value of Symphony Icon, Inc. purchase liability $ 477,000 $ 2,162,000 $ 1,741,000 $ 4,243,000